Gene : Cucsa.398220 C. sativus v1.0
Defline:  (1 of 2) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) Genomic Order:  60
Name:  ? Cucsa.398220 Secondary Identifier:  ? PAC:16983602
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.398220 0.5kb upstream 0.5kb upstream 6123 true scaffold04158: 791330-797452 Cucumis sativus
Cucsa.398220 0.5kb upstream 0.5kb upstream 500 false scaffold04158: 796953-797452 Cucumis sativus
Cucsa.398220 0.5kb downstream 0.5kb downstream 6123 true scaffold04158: 790830-796952 Cucumis sativus
Cucsa.398220 0.5kb downstream 0.5kb downstream 500 false scaffold04158: 790830-791329 Cucumis sativus
Cucsa.398220 1.0kb upstream 1.0kb upstream 6623 true scaffold04158: 791330-797952 Cucumis sativus
Cucsa.398220 1.0kb upstream 1.0kb upstream 1000 false scaffold04158: 796953-797952 Cucumis sativus
Cucsa.398220 1.0kb downstream 1.0kb downstream 6623 true scaffold04158: 790330-796952 Cucumis sativus
Cucsa.398220 1.0kb downstream 1.0kb downstream 1000 false scaffold04158: 790330-791329 Cucumis sativus
Cucsa.398220 2.0kb upstream 2.0kb upstream 7623 true scaffold04158: 791330-798952 Cucumis sativus
Cucsa.398220 2.0kb upstream 2.0kb upstream 2000 false scaffold04158: 796953-798952 Cucumis sativus
Cucsa.398220 2.0kb downstream 2.0kb downstream 7623 true scaffold04158: 789330-796952 Cucumis sativus
Cucsa.398220 2.0kb downstream 2.0kb downstream 2000 false scaffold04158: 789330-791329 Cucumis sativus
Cucsa.398220 5.0kb upstream 5.0kb upstream 10623 true scaffold04158: 791330-801952 Cucumis sativus
Cucsa.398220 5.0kb upstream 5.0kb upstream 5000 false scaffold04158: 796953-801952 Cucumis sativus
Cucsa.398220 5.0kb downstream 5.0kb downstream 10623 true scaffold04158: 786330-796952 Cucumis sativus
Cucsa.398220 5.0kb downstream 5.0kb downstream 5000 false scaffold04158: 786330-791329 Cucumis sativus
Cucsa.398220 10.0kb upstream 10.0kb upstream 15623 true scaffold04158: 791330-806952 Cucumis sativus
Cucsa.398220 10.0kb upstream 10.0kb upstream 10000 false scaffold04158: 796953-806952 Cucumis sativus
Cucsa.398220 10.0kb downstream 10.0kb downstream 15623 true scaffold04158: 781330-796952 Cucumis sativus
Cucsa.398220 10.0kb downstream 10.0kb downstream 10000 false scaffold04158: 781330-791329 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606378 5273 Angiosperm Singleton cluster - no MSA
122236648 5265 Fabidae Singleton cluster - no MSA
123982858 5270 Rosid Singleton cluster - no MSA
123558532 5271 Pentapetalae Singleton cluster - no MSA
122593346 5272 Eudicot Singleton cluster - no MSA
120878668 5274 Embryophyte Singleton cluster - no MSA
122919557 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain