Gene : Cucsa.397650 C. sativus v1.0
Defline:  (1 of 1) PTHR19919:SF2 - PROTEIN TRANSPARENT TESTA GLABRA 1 Genomic Order:  6
Name:  ? Cucsa.397650 Secondary Identifier:  ? PAC:16983529
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.397650 0.5kb upstream 0.5kb upstream 1502 true scaffold04158: 61374-62875 Cucumis sativus
Cucsa.397650 0.5kb upstream 0.5kb upstream 500 false scaffold04158: 62376-62875 Cucumis sativus
Cucsa.397650 0.5kb downstream 0.5kb downstream 1502 true scaffold04158: 60874-62375 Cucumis sativus
Cucsa.397650 0.5kb downstream 0.5kb downstream 500 false scaffold04158: 60874-61373 Cucumis sativus
Cucsa.397650 1.0kb upstream 1.0kb upstream 2002 true scaffold04158: 61374-63375 Cucumis sativus
Cucsa.397650 1.0kb upstream 1.0kb upstream 1000 false scaffold04158: 62376-63375 Cucumis sativus
Cucsa.397650 1.0kb downstream 1.0kb downstream 2002 true scaffold04158: 60374-62375 Cucumis sativus
Cucsa.397650 1.0kb downstream 1.0kb downstream 1000 false scaffold04158: 60374-61373 Cucumis sativus
Cucsa.397650 2.0kb upstream 2.0kb upstream 3002 true scaffold04158: 61374-64375 Cucumis sativus
Cucsa.397650 2.0kb upstream 2.0kb upstream 2000 false scaffold04158: 62376-64375 Cucumis sativus
Cucsa.397650 2.0kb downstream 2.0kb downstream 3002 true scaffold04158: 59374-62375 Cucumis sativus
Cucsa.397650 2.0kb downstream 2.0kb downstream 2000 false scaffold04158: 59374-61373 Cucumis sativus
Cucsa.397650 5.0kb upstream 5.0kb upstream 6002 true scaffold04158: 61374-67375 Cucumis sativus
Cucsa.397650 5.0kb upstream 5.0kb upstream 5000 false scaffold04158: 62376-67375 Cucumis sativus
Cucsa.397650 5.0kb downstream 5.0kb downstream 6002 true scaffold04158: 56374-62375 Cucumis sativus
Cucsa.397650 5.0kb downstream 5.0kb downstream 5000 false scaffold04158: 56374-61373 Cucumis sativus
Cucsa.397650 10.0kb upstream 10.0kb upstream 11002 true scaffold04158: 61374-72375 Cucumis sativus
Cucsa.397650 10.0kb upstream 10.0kb upstream 10000 false scaffold04158: 62376-72375 Cucumis sativus
Cucsa.397650 10.0kb downstream 10.0kb downstream 11002 true scaffold04158: 51374-62375 Cucumis sativus
Cucsa.397650 10.0kb downstream 10.0kb downstream 10000 false scaffold04158: 51374-61373 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301131 5265 Fabidae View MSA
124066004 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain