Gene : Cucsa.397620 C. sativus v1.0
Defline:  (1 of 1) PTHR13697//PTHR13697:SF20 - PHOSPHOFRUCTOKINASE Genomic Order:  3
Name:  ? Cucsa.397620 Secondary Identifier:  ? PAC:16983525
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ANAEROFRUCAT-PWY Cucumis sativus pathologic  
Csativus ANAGLYCOLYSIS-PWY Cucumis sativus pathologic  
Csativus PWY-1042 Cucumis sativus pathologic  
Csativus PWY-5464 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.397620 0.5kb upstream 0.5kb upstream 5256 true scaffold04158: 38494-43749 Cucumis sativus
Cucsa.397620 0.5kb upstream 0.5kb upstream 500 false scaffold04158: 38494-38993 Cucumis sativus
Cucsa.397620 0.5kb downstream 0.5kb downstream 5256 true scaffold04158: 38994-44249 Cucumis sativus
Cucsa.397620 0.5kb downstream 0.5kb downstream 500 false scaffold04158: 43750-44249 Cucumis sativus
Cucsa.397620 1.0kb upstream 1.0kb upstream 5756 true scaffold04158: 37994-43749 Cucumis sativus
Cucsa.397620 1.0kb upstream 1.0kb upstream 1000 false scaffold04158: 37994-38993 Cucumis sativus
Cucsa.397620 1.0kb downstream 1.0kb downstream 5756 true scaffold04158: 38994-44749 Cucumis sativus
Cucsa.397620 1.0kb downstream 1.0kb downstream 1000 false scaffold04158: 43750-44749 Cucumis sativus
Cucsa.397620 2.0kb upstream 2.0kb upstream 6756 true scaffold04158: 36994-43749 Cucumis sativus
Cucsa.397620 2.0kb upstream 2.0kb upstream 2000 false scaffold04158: 36994-38993 Cucumis sativus
Cucsa.397620 2.0kb downstream 2.0kb downstream 6756 true scaffold04158: 38994-45749 Cucumis sativus
Cucsa.397620 2.0kb downstream 2.0kb downstream 2000 false scaffold04158: 43750-45749 Cucumis sativus
Cucsa.397620 5.0kb upstream 5.0kb upstream 9756 true scaffold04158: 33994-43749 Cucumis sativus
Cucsa.397620 5.0kb upstream 5.0kb upstream 5000 false scaffold04158: 33994-38993 Cucumis sativus
Cucsa.397620 5.0kb downstream 5.0kb downstream 9756 true scaffold04158: 38994-48749 Cucumis sativus
Cucsa.397620 5.0kb downstream 5.0kb downstream 5000 false scaffold04158: 43750-48749 Cucumis sativus
Cucsa.397620 10.0kb upstream 10.0kb upstream 14756 true scaffold04158: 28994-43749 Cucumis sativus
Cucsa.397620 10.0kb upstream 10.0kb upstream 10000 false scaffold04158: 28994-38993 Cucumis sativus
Cucsa.397620 10.0kb downstream 10.0kb downstream 14756 true scaffold04158: 38994-53749 Cucumis sativus
Cucsa.397620 10.0kb downstream 10.0kb downstream 10000 false scaffold04158: 43750-53749 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606356 5273 Angiosperm Singleton cluster - no MSA
122236626 5265 Fabidae Singleton cluster - no MSA
123982836 5270 Rosid Singleton cluster - no MSA
123558510 5271 Pentapetalae Singleton cluster - no MSA
122593324 5272 Eudicot Singleton cluster - no MSA
120878646 5274 Embryophyte Singleton cluster - no MSA
122919535 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain