Gene : Cucsa.385730 C. sativus v1.0
Defline:  (1 of 1) PTHR10459:SF10 - DNA LIGASE 1 Genomic Order:  103
Name:  ? Cucsa.385730 Secondary Identifier:  ? PAC:16982619
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.385730 0.5kb upstream 0.5kb upstream 8078 true scaffold03904: 987967-996044 Cucumis sativus
Cucsa.385730 0.5kb upstream 0.5kb upstream 500 false scaffold03904: 987967-988466 Cucumis sativus
Cucsa.385730 0.5kb downstream 0.5kb downstream 8078 true scaffold03904: 988467-996544 Cucumis sativus
Cucsa.385730 0.5kb downstream 0.5kb downstream 500 false scaffold03904: 996045-996544 Cucumis sativus
Cucsa.385730 1.0kb upstream 1.0kb upstream 8578 true scaffold03904: 987467-996044 Cucumis sativus
Cucsa.385730 1.0kb upstream 1.0kb upstream 1000 false scaffold03904: 987467-988466 Cucumis sativus
Cucsa.385730 1.0kb downstream 1.0kb downstream 8578 true scaffold03904: 988467-997044 Cucumis sativus
Cucsa.385730 1.0kb downstream 1.0kb downstream 1000 false scaffold03904: 996045-997044 Cucumis sativus
Cucsa.385730 2.0kb upstream 2.0kb upstream 9578 true scaffold03904: 986467-996044 Cucumis sativus
Cucsa.385730 2.0kb upstream 2.0kb upstream 2000 false scaffold03904: 986467-988466 Cucumis sativus
Cucsa.385730 2.0kb downstream 2.0kb downstream 9578 true scaffold03904: 988467-998044 Cucumis sativus
Cucsa.385730 2.0kb downstream 2.0kb downstream 2000 false scaffold03904: 996045-998044 Cucumis sativus
Cucsa.385730 5.0kb upstream 5.0kb upstream 12578 true scaffold03904: 983467-996044 Cucumis sativus
Cucsa.385730 5.0kb upstream 5.0kb upstream 5000 false scaffold03904: 983467-988466 Cucumis sativus
Cucsa.385730 5.0kb downstream 5.0kb downstream 12578 true scaffold03904: 988467-1001044 Cucumis sativus
Cucsa.385730 5.0kb downstream 5.0kb downstream 5000 false scaffold03904: 996045-1001044 Cucumis sativus
Cucsa.385730 10.0kb upstream 10.0kb upstream 17578 true scaffold03904: 978467-996044 Cucumis sativus
Cucsa.385730 10.0kb upstream 10.0kb upstream 10000 false scaffold03904: 978467-988466 Cucumis sativus
Cucsa.385730 10.0kb downstream 10.0kb downstream 17578 true scaffold03904: 988467-1006044 Cucumis sativus
Cucsa.385730 10.0kb downstream 10.0kb downstream 10000 false scaffold03904: 996045-1006044 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305144 5265 Fabidae View MSA
124060401 5270 Rosid View MSA
123746296 5271 Pentapetalae View MSA
122793355 5272 Eudicot View MSA
122047557 5273 Angiosperm View MSA
121348285 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain