Gene : Cucsa.383270 C. sativus v1.0
Defline:  (1 of 1) PTHR11659 - GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED Genomic Order:  24
Name:  ? Cucsa.383270 Secondary Identifier:  ? PAC:16982345
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5921 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.383270 0.5kb upstream 0.5kb upstream 4988 true scaffold03882: 262449-267436 Cucumis sativus
Cucsa.383270 0.5kb upstream 0.5kb upstream 500 false scaffold03882: 262449-262948 Cucumis sativus
Cucsa.383270 0.5kb downstream 0.5kb downstream 4988 true scaffold03882: 262949-267936 Cucumis sativus
Cucsa.383270 0.5kb downstream 0.5kb downstream 500 false scaffold03882: 267437-267936 Cucumis sativus
Cucsa.383270 1.0kb upstream 1.0kb upstream 5488 true scaffold03882: 261949-267436 Cucumis sativus
Cucsa.383270 1.0kb upstream 1.0kb upstream 1000 false scaffold03882: 261949-262948 Cucumis sativus
Cucsa.383270 1.0kb downstream 1.0kb downstream 5488 true scaffold03882: 262949-268436 Cucumis sativus
Cucsa.383270 1.0kb downstream 1.0kb downstream 1000 false scaffold03882: 267437-268436 Cucumis sativus
Cucsa.383270 2.0kb upstream 2.0kb upstream 6488 true scaffold03882: 260949-267436 Cucumis sativus
Cucsa.383270 2.0kb upstream 2.0kb upstream 2000 false scaffold03882: 260949-262948 Cucumis sativus
Cucsa.383270 2.0kb downstream 2.0kb downstream 6488 true scaffold03882: 262949-269436 Cucumis sativus
Cucsa.383270 2.0kb downstream 2.0kb downstream 2000 false scaffold03882: 267437-269436 Cucumis sativus
Cucsa.383270 5.0kb upstream 5.0kb upstream 9488 true scaffold03882: 257949-267436 Cucumis sativus
Cucsa.383270 5.0kb upstream 5.0kb upstream 5000 false scaffold03882: 257949-262948 Cucumis sativus
Cucsa.383270 5.0kb downstream 5.0kb downstream 9488 true scaffold03882: 262949-272436 Cucumis sativus
Cucsa.383270 5.0kb downstream 5.0kb downstream 5000 false scaffold03882: 267437-272436 Cucumis sativus
Cucsa.383270 10.0kb upstream 10.0kb upstream 14488 true scaffold03882: 252949-267436 Cucumis sativus
Cucsa.383270 10.0kb upstream 10.0kb upstream 10000 false scaffold03882: 252949-262948 Cucumis sativus
Cucsa.383270 10.0kb downstream 10.0kb downstream 14488 true scaffold03882: 262949-277436 Cucumis sativus
Cucsa.383270 10.0kb downstream 10.0kb downstream 10000 false scaffold03882: 267437-277436 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304937 5265 Fabidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain