Gene : Cucsa.379900 C. sativus v1.0
Defline:  (1 of 14) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  30
Name:  ? Cucsa.379900 Secondary Identifier:  ? PAC:16982181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.379900 0.5kb upstream 0.5kb upstream 3657 true scaffold03837: 283104-286760 Cucumis sativus
Cucsa.379900 0.5kb upstream 0.5kb upstream 500 false scaffold03837: 283104-283603 Cucumis sativus
Cucsa.379900 0.5kb downstream 0.5kb downstream 3657 true scaffold03837: 283604-287260 Cucumis sativus
Cucsa.379900 0.5kb downstream 0.5kb downstream 500 false scaffold03837: 286761-287260 Cucumis sativus
Cucsa.379900 1.0kb upstream 1.0kb upstream 4157 true scaffold03837: 282604-286760 Cucumis sativus
Cucsa.379900 1.0kb upstream 1.0kb upstream 1000 false scaffold03837: 282604-283603 Cucumis sativus
Cucsa.379900 1.0kb downstream 1.0kb downstream 4157 true scaffold03837: 283604-287760 Cucumis sativus
Cucsa.379900 1.0kb downstream 1.0kb downstream 1000 false scaffold03837: 286761-287760 Cucumis sativus
Cucsa.379900 2.0kb upstream 2.0kb upstream 5157 true scaffold03837: 281604-286760 Cucumis sativus
Cucsa.379900 2.0kb upstream 2.0kb upstream 2000 false scaffold03837: 281604-283603 Cucumis sativus
Cucsa.379900 2.0kb downstream 2.0kb downstream 5157 true scaffold03837: 283604-288760 Cucumis sativus
Cucsa.379900 2.0kb downstream 2.0kb downstream 2000 false scaffold03837: 286761-288760 Cucumis sativus
Cucsa.379900 5.0kb upstream 5.0kb upstream 8157 true scaffold03837: 278604-286760 Cucumis sativus
Cucsa.379900 5.0kb upstream 5.0kb upstream 5000 false scaffold03837: 278604-283603 Cucumis sativus
Cucsa.379900 5.0kb downstream 5.0kb downstream 8157 true scaffold03837: 283604-291760 Cucumis sativus
Cucsa.379900 5.0kb downstream 5.0kb downstream 5000 false scaffold03837: 286761-291760 Cucumis sativus
Cucsa.379900 10.0kb upstream 10.0kb upstream 13157 true scaffold03837: 273604-286760 Cucumis sativus
Cucsa.379900 10.0kb upstream 10.0kb upstream 10000 false scaffold03837: 273604-283603 Cucumis sativus
Cucsa.379900 10.0kb downstream 10.0kb downstream 13157 true scaffold03837: 283604-296760 Cucumis sativus
Cucsa.379900 10.0kb downstream 10.0kb downstream 10000 false scaffold03837: 286761-296760 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309449 5265 Fabidae View MSA
124065450 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain