Gene : Cucsa.379870 C. sativus v1.0
Defline:  (1 of 2) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  27
Name:  ? Cucsa.379870 Secondary Identifier:  ? PAC:16982174
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5080 Cucumis sativus pathologic  
Csativus PWY-6433 Cucumis sativus pathologic  
Csativus PWY-6598 Cucumis sativus pathologic  
Csativus PWY-7036 Cucumis sativus pathologic  
Csativus PWY-7601 Cucumis sativus pathologic  
Csativus PWY-7606 Cucumis sativus pathologic  
Csativus PWY-7619 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.379870 0.5kb upstream 0.5kb upstream 3564 true scaffold03837: 252097-255660 Cucumis sativus
Cucsa.379870 0.5kb upstream 0.5kb upstream 500 false scaffold03837: 255161-255660 Cucumis sativus
Cucsa.379870 0.5kb downstream 0.5kb downstream 3564 true scaffold03837: 251597-255160 Cucumis sativus
Cucsa.379870 0.5kb downstream 0.5kb downstream 500 false scaffold03837: 251597-252096 Cucumis sativus
Cucsa.379870 1.0kb upstream 1.0kb upstream 4064 true scaffold03837: 252097-256160 Cucumis sativus
Cucsa.379870 1.0kb upstream 1.0kb upstream 1000 false scaffold03837: 255161-256160 Cucumis sativus
Cucsa.379870 1.0kb downstream 1.0kb downstream 4064 true scaffold03837: 251097-255160 Cucumis sativus
Cucsa.379870 1.0kb downstream 1.0kb downstream 1000 false scaffold03837: 251097-252096 Cucumis sativus
Cucsa.379870 2.0kb upstream 2.0kb upstream 5064 true scaffold03837: 252097-257160 Cucumis sativus
Cucsa.379870 2.0kb upstream 2.0kb upstream 2000 false scaffold03837: 255161-257160 Cucumis sativus
Cucsa.379870 2.0kb downstream 2.0kb downstream 5064 true scaffold03837: 250097-255160 Cucumis sativus
Cucsa.379870 2.0kb downstream 2.0kb downstream 2000 false scaffold03837: 250097-252096 Cucumis sativus
Cucsa.379870 5.0kb upstream 5.0kb upstream 8064 true scaffold03837: 252097-260160 Cucumis sativus
Cucsa.379870 5.0kb upstream 5.0kb upstream 5000 false scaffold03837: 255161-260160 Cucumis sativus
Cucsa.379870 5.0kb downstream 5.0kb downstream 8064 true scaffold03837: 247097-255160 Cucumis sativus
Cucsa.379870 5.0kb downstream 5.0kb downstream 5000 false scaffold03837: 247097-252096 Cucumis sativus
Cucsa.379870 10.0kb upstream 10.0kb upstream 13064 true scaffold03837: 252097-265160 Cucumis sativus
Cucsa.379870 10.0kb upstream 10.0kb upstream 10000 false scaffold03837: 255161-265160 Cucumis sativus
Cucsa.379870 10.0kb downstream 10.0kb downstream 13064 true scaffold03837: 242097-255160 Cucumis sativus
Cucsa.379870 10.0kb downstream 10.0kb downstream 10000 false scaffold03837: 242097-252096 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305698 5265 Fabidae View MSA
124067090 5270 Rosid View MSA
123747996 5271 Pentapetalae View MSA
122792245 5272 Eudicot View MSA
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain