Gene : Cucsa.375220 C. sativus v1.0
Defline:  (1 of 2) PTHR20852//PTHR20852:SF59 - GLUTAMINE SYNTHETASE Genomic Order:  6
Name:  ? Cucsa.375220 Secondary Identifier:  ? PAC:16981939
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLNSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3282 Cucumis sativus pathologic  
Csativus PWY-381 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  
Csativus PWY-6963 Cucumis sativus pathologic  
Csativus PWY-6964 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.375220 0.5kb upstream 0.5kb upstream 3710 true scaffold03746: 103067-106776 Cucumis sativus
Cucsa.375220 0.5kb upstream 0.5kb upstream 500 false scaffold03746: 103067-103566 Cucumis sativus
Cucsa.375220 0.5kb downstream 0.5kb downstream 3710 true scaffold03746: 103567-107276 Cucumis sativus
Cucsa.375220 0.5kb downstream 0.5kb downstream 500 false scaffold03746: 106777-107276 Cucumis sativus
Cucsa.375220 1.0kb upstream 1.0kb upstream 4210 true scaffold03746: 102567-106776 Cucumis sativus
Cucsa.375220 1.0kb upstream 1.0kb upstream 1000 false scaffold03746: 102567-103566 Cucumis sativus
Cucsa.375220 1.0kb downstream 1.0kb downstream 4210 true scaffold03746: 103567-107776 Cucumis sativus
Cucsa.375220 1.0kb downstream 1.0kb downstream 1000 false scaffold03746: 106777-107776 Cucumis sativus
Cucsa.375220 2.0kb upstream 2.0kb upstream 5210 true scaffold03746: 101567-106776 Cucumis sativus
Cucsa.375220 2.0kb upstream 2.0kb upstream 2000 false scaffold03746: 101567-103566 Cucumis sativus
Cucsa.375220 2.0kb downstream 2.0kb downstream 5210 true scaffold03746: 103567-108776 Cucumis sativus
Cucsa.375220 2.0kb downstream 2.0kb downstream 2000 false scaffold03746: 106777-108776 Cucumis sativus
Cucsa.375220 5.0kb upstream 5.0kb upstream 8210 true scaffold03746: 98567-106776 Cucumis sativus
Cucsa.375220 5.0kb upstream 5.0kb upstream 5000 false scaffold03746: 98567-103566 Cucumis sativus
Cucsa.375220 5.0kb downstream 5.0kb downstream 8210 true scaffold03746: 103567-111776 Cucumis sativus
Cucsa.375220 5.0kb downstream 5.0kb downstream 5000 false scaffold03746: 106777-111776 Cucumis sativus
Cucsa.375220 10.0kb upstream 10.0kb upstream 13210 true scaffold03746: 93567-106776 Cucumis sativus
Cucsa.375220 10.0kb upstream 10.0kb upstream 10000 false scaffold03746: 93567-103566 Cucumis sativus
Cucsa.375220 10.0kb downstream 10.0kb downstream 13210 true scaffold03746: 103567-116776 Cucumis sativus
Cucsa.375220 10.0kb downstream 10.0kb downstream 10000 false scaffold03746: 106777-116776 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309647 5265 Fabidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain