Gene : Cucsa.388080 C. sativus v1.0
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  41
Name:  ? Cucsa.388080 Secondary Identifier:  ? PAC:16982802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.388080 0.5kb upstream 0.5kb upstream 3957 true scaffold03967: 538134-542090 Cucumis sativus
Cucsa.388080 0.5kb upstream 0.5kb upstream 500 false scaffold03967: 541591-542090 Cucumis sativus
Cucsa.388080 0.5kb downstream 0.5kb downstream 3957 true scaffold03967: 537634-541590 Cucumis sativus
Cucsa.388080 0.5kb downstream 0.5kb downstream 500 false scaffold03967: 537634-538133 Cucumis sativus
Cucsa.388080 1.0kb upstream 1.0kb upstream 4457 true scaffold03967: 538134-542590 Cucumis sativus
Cucsa.388080 1.0kb upstream 1.0kb upstream 1000 false scaffold03967: 541591-542590 Cucumis sativus
Cucsa.388080 1.0kb downstream 1.0kb downstream 4457 true scaffold03967: 537134-541590 Cucumis sativus
Cucsa.388080 1.0kb downstream 1.0kb downstream 1000 false scaffold03967: 537134-538133 Cucumis sativus
Cucsa.388080 2.0kb upstream 2.0kb upstream 5457 true scaffold03967: 538134-543590 Cucumis sativus
Cucsa.388080 2.0kb upstream 2.0kb upstream 2000 false scaffold03967: 541591-543590 Cucumis sativus
Cucsa.388080 2.0kb downstream 2.0kb downstream 5457 true scaffold03967: 536134-541590 Cucumis sativus
Cucsa.388080 2.0kb downstream 2.0kb downstream 2000 false scaffold03967: 536134-538133 Cucumis sativus
Cucsa.388080 5.0kb upstream 5.0kb upstream 8457 true scaffold03967: 538134-546590 Cucumis sativus
Cucsa.388080 5.0kb upstream 5.0kb upstream 5000 false scaffold03967: 541591-546590 Cucumis sativus
Cucsa.388080 5.0kb downstream 5.0kb downstream 8457 true scaffold03967: 533134-541590 Cucumis sativus
Cucsa.388080 5.0kb downstream 5.0kb downstream 5000 false scaffold03967: 533134-538133 Cucumis sativus
Cucsa.388080 10.0kb upstream 10.0kb upstream 13457 true scaffold03967: 538134-551590 Cucumis sativus
Cucsa.388080 10.0kb upstream 10.0kb upstream 10000 false scaffold03967: 541591-551590 Cucumis sativus
Cucsa.388080 10.0kb downstream 10.0kb downstream 13457 true scaffold03967: 528134-541590 Cucumis sativus
Cucsa.388080 10.0kb downstream 10.0kb downstream 10000 false scaffold03967: 528134-538133 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301843 5265 Fabidae View MSA
124060540 5270 Rosid View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain