Gene : Cucsa.387680 C. sativus v1.0
Defline:  (1 of 1) PTHR12565//PTHR12565:SF99 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  1
Name:  ? Cucsa.387680 Secondary Identifier:  ? PAC:16982748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.387680 0.5kb upstream 0.5kb upstream 3193 true scaffold03967: 33755-36947 Cucumis sativus
Cucsa.387680 0.5kb upstream 0.5kb upstream 500 false scaffold03967: 33755-34254 Cucumis sativus
Cucsa.387680 0.5kb downstream 0.5kb downstream 3193 true scaffold03967: 34255-37447 Cucumis sativus
Cucsa.387680 0.5kb downstream 0.5kb downstream 500 false scaffold03967: 36948-37447 Cucumis sativus
Cucsa.387680 1.0kb upstream 1.0kb upstream 3693 true scaffold03967: 33255-36947 Cucumis sativus
Cucsa.387680 1.0kb upstream 1.0kb upstream 1000 false scaffold03967: 33255-34254 Cucumis sativus
Cucsa.387680 1.0kb downstream 1.0kb downstream 3693 true scaffold03967: 34255-37947 Cucumis sativus
Cucsa.387680 1.0kb downstream 1.0kb downstream 1000 false scaffold03967: 36948-37947 Cucumis sativus
Cucsa.387680 2.0kb upstream 2.0kb upstream 4693 true scaffold03967: 32255-36947 Cucumis sativus
Cucsa.387680 2.0kb upstream 2.0kb upstream 2000 false scaffold03967: 32255-34254 Cucumis sativus
Cucsa.387680 2.0kb downstream 2.0kb downstream 4693 true scaffold03967: 34255-38947 Cucumis sativus
Cucsa.387680 2.0kb downstream 2.0kb downstream 2000 false scaffold03967: 36948-38947 Cucumis sativus
Cucsa.387680 5.0kb upstream 5.0kb upstream 7693 true scaffold03967: 29255-36947 Cucumis sativus
Cucsa.387680 5.0kb upstream 5.0kb upstream 5000 false scaffold03967: 29255-34254 Cucumis sativus
Cucsa.387680 5.0kb downstream 5.0kb downstream 7693 true scaffold03967: 34255-41947 Cucumis sativus
Cucsa.387680 5.0kb downstream 5.0kb downstream 5000 false scaffold03967: 36948-41947 Cucumis sativus
Cucsa.387680 10.0kb upstream 10.0kb upstream 12693 true scaffold03967: 24255-36947 Cucumis sativus
Cucsa.387680 10.0kb upstream 10.0kb upstream 10000 false scaffold03967: 24255-34254 Cucumis sativus
Cucsa.387680 10.0kb downstream 10.0kb downstream 12693 true scaffold03967: 34255-46947 Cucumis sativus
Cucsa.387680 10.0kb downstream 10.0kb downstream 10000 false scaffold03967: 36948-46947 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305035 5265 Fabidae View MSA
124071713 5270 Rosid View MSA
123752095 5271 Pentapetalae View MSA
122794860 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain