Gene : Cucsa.386840 C. sativus v1.0
Defline:  (1 of 1) PTHR33428:SF1 - CHLOROPHYLLASE-2, CHLOROPLASTIC Genomic Order:  28
Name:  ? Cucsa.386840 Secondary Identifier:  ? PAC:16982739
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5098 Cucumis sativus pathologic  
Csativus PWY-6927 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.386840 0.5kb upstream 0.5kb upstream 2631 true scaffold03918: 363861-366491 Cucumis sativus
Cucsa.386840 0.5kb upstream 0.5kb upstream 500 false scaffold03918: 365992-366491 Cucumis sativus
Cucsa.386840 0.5kb downstream 0.5kb downstream 2631 true scaffold03918: 363361-365991 Cucumis sativus
Cucsa.386840 0.5kb downstream 0.5kb downstream 500 false scaffold03918: 363361-363860 Cucumis sativus
Cucsa.386840 1.0kb upstream 1.0kb upstream 3131 true scaffold03918: 363861-366991 Cucumis sativus
Cucsa.386840 1.0kb upstream 1.0kb upstream 1000 false scaffold03918: 365992-366991 Cucumis sativus
Cucsa.386840 1.0kb downstream 1.0kb downstream 3131 true scaffold03918: 362861-365991 Cucumis sativus
Cucsa.386840 1.0kb downstream 1.0kb downstream 1000 false scaffold03918: 362861-363860 Cucumis sativus
Cucsa.386840 2.0kb upstream 2.0kb upstream 4131 true scaffold03918: 363861-367991 Cucumis sativus
Cucsa.386840 2.0kb upstream 2.0kb upstream 2000 false scaffold03918: 365992-367991 Cucumis sativus
Cucsa.386840 2.0kb downstream 2.0kb downstream 4131 true scaffold03918: 361861-365991 Cucumis sativus
Cucsa.386840 2.0kb downstream 2.0kb downstream 2000 false scaffold03918: 361861-363860 Cucumis sativus
Cucsa.386840 5.0kb upstream 5.0kb upstream 7131 true scaffold03918: 363861-370991 Cucumis sativus
Cucsa.386840 5.0kb upstream 5.0kb upstream 5000 false scaffold03918: 365992-370991 Cucumis sativus
Cucsa.386840 5.0kb downstream 5.0kb downstream 7131 true scaffold03918: 358861-365991 Cucumis sativus
Cucsa.386840 5.0kb downstream 5.0kb downstream 5000 false scaffold03918: 358861-363860 Cucumis sativus
Cucsa.386840 10.0kb upstream 10.0kb upstream 12131 true scaffold03918: 363861-375991 Cucumis sativus
Cucsa.386840 10.0kb upstream 10.0kb upstream 10000 false scaffold03918: 365992-375991 Cucumis sativus
Cucsa.386840 10.0kb downstream 10.0kb downstream 12131 true scaffold03918: 353861-365991 Cucumis sativus
Cucsa.386840 10.0kb downstream 10.0kb downstream 10000 false scaffold03918: 353861-363860 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303758 5265 Fabidae View MSA
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain