Gene : Cucsa.385960 C. sativus v1.0
Defline:  (1 of 40) PF03330 - Rare lipoprotein A (RlpA)-like double-psi beta-barrel Genomic Order:  124
Name:  ? Cucsa.385960 Secondary Identifier:  ? PAC:16982657
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.385960 0.5kb upstream 0.5kb upstream 1117 true scaffold03904: 1137072-1138188 Cucumis sativus
Cucsa.385960 0.5kb upstream 0.5kb upstream 500 false scaffold03904: 1137072-1137571 Cucumis sativus
Cucsa.385960 0.5kb downstream 0.5kb downstream 1117 true scaffold03904: 1137572-1138688 Cucumis sativus
Cucsa.385960 0.5kb downstream 0.5kb downstream 500 false scaffold03904: 1138189-1138688 Cucumis sativus
Cucsa.385960 1.0kb upstream 1.0kb upstream 1617 true scaffold03904: 1136572-1138188 Cucumis sativus
Cucsa.385960 1.0kb upstream 1.0kb upstream 1000 false scaffold03904: 1136572-1137571 Cucumis sativus
Cucsa.385960 1.0kb downstream 1.0kb downstream 1617 true scaffold03904: 1137572-1139188 Cucumis sativus
Cucsa.385960 1.0kb downstream 1.0kb downstream 1000 false scaffold03904: 1138189-1139188 Cucumis sativus
Cucsa.385960 2.0kb upstream 2.0kb upstream 2617 true scaffold03904: 1135572-1138188 Cucumis sativus
Cucsa.385960 2.0kb upstream 2.0kb upstream 2000 false scaffold03904: 1135572-1137571 Cucumis sativus
Cucsa.385960 2.0kb downstream 2.0kb downstream 2617 true scaffold03904: 1137572-1140188 Cucumis sativus
Cucsa.385960 2.0kb downstream 2.0kb downstream 2000 false scaffold03904: 1138189-1140188 Cucumis sativus
Cucsa.385960 5.0kb upstream 5.0kb upstream 5617 true scaffold03904: 1132572-1138188 Cucumis sativus
Cucsa.385960 5.0kb upstream 5.0kb upstream 5000 false scaffold03904: 1132572-1137571 Cucumis sativus
Cucsa.385960 5.0kb downstream 5.0kb downstream 5617 true scaffold03904: 1137572-1143188 Cucumis sativus
Cucsa.385960 5.0kb downstream 5.0kb downstream 5000 false scaffold03904: 1138189-1143188 Cucumis sativus
Cucsa.385960 10.0kb upstream 10.0kb upstream 10617 true scaffold03904: 1127572-1138188 Cucumis sativus
Cucsa.385960 10.0kb upstream 10.0kb upstream 10000 false scaffold03904: 1127572-1137571 Cucumis sativus
Cucsa.385960 10.0kb downstream 10.0kb downstream 10617 true scaffold03904: 1137572-1148188 Cucumis sativus
Cucsa.385960 10.0kb downstream 10.0kb downstream 10000 false scaffold03904: 1138189-1148188 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309705 5265 Fabidae View MSA
124069743 5270 Rosid View MSA
123742356 5271 Pentapetalae View MSA
122770271 5272 Eudicot View MSA
122049073 5273 Angiosperm View MSA
121348400 5274 Embryophyte View MSA
123380848 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain