Gene : Cucsa.385680 C. sativus v1.0
Defline:  (1 of 1) PTHR10003:SF34 - SUPEROXIDE DISMUTASE [CU-ZN] 2, CHLOROPLASTIC Genomic Order:  98
Name:  ? Cucsa.385680 Secondary Identifier:  ? PAC:16982607
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus DETOX1-PWY Cucumis sativus pathologic  
Csativus DETOX1-PWY-1 Cucumis sativus pathologic  
Csativus PWY-6854 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.385680 0.5kb upstream 0.5kb upstream 4426 true scaffold03904: 951963-956388 Cucumis sativus
Cucsa.385680 0.5kb upstream 0.5kb upstream 500 false scaffold03904: 955889-956388 Cucumis sativus
Cucsa.385680 0.5kb downstream 0.5kb downstream 4426 true scaffold03904: 951463-955888 Cucumis sativus
Cucsa.385680 0.5kb downstream 0.5kb downstream 500 false scaffold03904: 951463-951962 Cucumis sativus
Cucsa.385680 1.0kb upstream 1.0kb upstream 4926 true scaffold03904: 951963-956888 Cucumis sativus
Cucsa.385680 1.0kb upstream 1.0kb upstream 1000 false scaffold03904: 955889-956888 Cucumis sativus
Cucsa.385680 1.0kb downstream 1.0kb downstream 4926 true scaffold03904: 950963-955888 Cucumis sativus
Cucsa.385680 1.0kb downstream 1.0kb downstream 1000 false scaffold03904: 950963-951962 Cucumis sativus
Cucsa.385680 2.0kb upstream 2.0kb upstream 5926 true scaffold03904: 951963-957888 Cucumis sativus
Cucsa.385680 2.0kb upstream 2.0kb upstream 2000 false scaffold03904: 955889-957888 Cucumis sativus
Cucsa.385680 2.0kb downstream 2.0kb downstream 5926 true scaffold03904: 949963-955888 Cucumis sativus
Cucsa.385680 2.0kb downstream 2.0kb downstream 2000 false scaffold03904: 949963-951962 Cucumis sativus
Cucsa.385680 5.0kb upstream 5.0kb upstream 8926 true scaffold03904: 951963-960888 Cucumis sativus
Cucsa.385680 5.0kb upstream 5.0kb upstream 5000 false scaffold03904: 955889-960888 Cucumis sativus
Cucsa.385680 5.0kb downstream 5.0kb downstream 8926 true scaffold03904: 946963-955888 Cucumis sativus
Cucsa.385680 5.0kb downstream 5.0kb downstream 5000 false scaffold03904: 946963-951962 Cucumis sativus
Cucsa.385680 10.0kb upstream 10.0kb upstream 13926 true scaffold03904: 951963-965888 Cucumis sativus
Cucsa.385680 10.0kb upstream 10.0kb upstream 10000 false scaffold03904: 955889-965888 Cucumis sativus
Cucsa.385680 10.0kb downstream 10.0kb downstream 13926 true scaffold03904: 941963-955888 Cucumis sativus
Cucsa.385680 10.0kb downstream 10.0kb downstream 10000 false scaffold03904: 941963-951962 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299889 5265 Fabidae View MSA
124067425 5270 Rosid View MSA
123737273 5271 Pentapetalae View MSA
122788875 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain