Gene : Cucsa.044210 C. sativus v1.0
Defline:  (1 of 1) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  119
Name:  ? Cucsa.044210 Secondary Identifier:  ? PAC:16953166
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CYSTSYN-PWY Cucumis sativus pathologic  
Csativus PWY-6936 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.044210 0.5kb upstream 0.5kb upstream 3550 true scaffold00542: 667874-671423 Cucumis sativus
Cucsa.044210 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 667874-668373 Cucumis sativus
Cucsa.044210 0.5kb downstream 0.5kb downstream 3550 true scaffold00542: 668374-671923 Cucumis sativus
Cucsa.044210 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 671424-671923 Cucumis sativus
Cucsa.044210 1.0kb upstream 1.0kb upstream 4050 true scaffold00542: 667374-671423 Cucumis sativus
Cucsa.044210 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 667374-668373 Cucumis sativus
Cucsa.044210 1.0kb downstream 1.0kb downstream 4050 true scaffold00542: 668374-672423 Cucumis sativus
Cucsa.044210 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 671424-672423 Cucumis sativus
Cucsa.044210 2.0kb upstream 2.0kb upstream 5050 true scaffold00542: 666374-671423 Cucumis sativus
Cucsa.044210 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 666374-668373 Cucumis sativus
Cucsa.044210 2.0kb downstream 2.0kb downstream 5050 true scaffold00542: 668374-673423 Cucumis sativus
Cucsa.044210 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 671424-673423 Cucumis sativus
Cucsa.044210 5.0kb upstream 5.0kb upstream 8050 true scaffold00542: 663374-671423 Cucumis sativus
Cucsa.044210 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 663374-668373 Cucumis sativus
Cucsa.044210 5.0kb downstream 5.0kb downstream 8050 true scaffold00542: 668374-676423 Cucumis sativus
Cucsa.044210 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 671424-676423 Cucumis sativus
Cucsa.044210 10.0kb upstream 10.0kb upstream 13050 true scaffold00542: 658374-671423 Cucumis sativus
Cucsa.044210 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 658374-668373 Cucumis sativus
Cucsa.044210 10.0kb downstream 10.0kb downstream 13050 true scaffold00542: 668374-681423 Cucumis sativus
Cucsa.044210 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 671424-681423 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304513 5265 Fabidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain