Gene : Cucsa.044080 C. sativus v1.0
Defline:  (1 of 1) PTHR12161:SF19 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  106
Name:  ? Cucsa.044080 Secondary Identifier:  ? PAC:16953152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.044080 0.5kb upstream 0.5kb upstream 2499 true scaffold00542: 615494-617992 Cucumis sativus
Cucsa.044080 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 617493-617992 Cucumis sativus
Cucsa.044080 0.5kb downstream 0.5kb downstream 2499 true scaffold00542: 614994-617492 Cucumis sativus
Cucsa.044080 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 614994-615493 Cucumis sativus
Cucsa.044080 1.0kb upstream 1.0kb upstream 2999 true scaffold00542: 615494-618492 Cucumis sativus
Cucsa.044080 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 617493-618492 Cucumis sativus
Cucsa.044080 1.0kb downstream 1.0kb downstream 2999 true scaffold00542: 614494-617492 Cucumis sativus
Cucsa.044080 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 614494-615493 Cucumis sativus
Cucsa.044080 2.0kb upstream 2.0kb upstream 3999 true scaffold00542: 615494-619492 Cucumis sativus
Cucsa.044080 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 617493-619492 Cucumis sativus
Cucsa.044080 2.0kb downstream 2.0kb downstream 3999 true scaffold00542: 613494-617492 Cucumis sativus
Cucsa.044080 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 613494-615493 Cucumis sativus
Cucsa.044080 5.0kb upstream 5.0kb upstream 6999 true scaffold00542: 615494-622492 Cucumis sativus
Cucsa.044080 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 617493-622492 Cucumis sativus
Cucsa.044080 5.0kb downstream 5.0kb downstream 6999 true scaffold00542: 610494-617492 Cucumis sativus
Cucsa.044080 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 610494-615493 Cucumis sativus
Cucsa.044080 10.0kb upstream 10.0kb upstream 11999 true scaffold00542: 615494-627492 Cucumis sativus
Cucsa.044080 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 617493-627492 Cucumis sativus
Cucsa.044080 10.0kb downstream 10.0kb downstream 11999 true scaffold00542: 605494-617492 Cucumis sativus
Cucsa.044080 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 605494-615493 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026573 5273 Angiosperm View MSA
122302069 5265 Fabidae View MSA
124050952 5270 Rosid View MSA
123738388 5271 Pentapetalae View MSA
122790971 5272 Eudicot View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain