Gene : Cucsa.043730 C. sativus v1.0
Defline:  (1 of 2) PTHR11599:SF15 - PROTEASOME SUBUNIT ALPHA TYPE Genomic Order:  71
Name:  ? Cucsa.043730 Secondary Identifier:  ? PAC:16953096
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.043730 0.5kb upstream 0.5kb upstream 4098 true scaffold00542: 441799-445896 Cucumis sativus
Cucsa.043730 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 441799-442298 Cucumis sativus
Cucsa.043730 0.5kb downstream 0.5kb downstream 4098 true scaffold00542: 442299-446396 Cucumis sativus
Cucsa.043730 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 445897-446396 Cucumis sativus
Cucsa.043730 1.0kb upstream 1.0kb upstream 4598 true scaffold00542: 441299-445896 Cucumis sativus
Cucsa.043730 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 441299-442298 Cucumis sativus
Cucsa.043730 1.0kb downstream 1.0kb downstream 4598 true scaffold00542: 442299-446896 Cucumis sativus
Cucsa.043730 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 445897-446896 Cucumis sativus
Cucsa.043730 2.0kb upstream 2.0kb upstream 5598 true scaffold00542: 440299-445896 Cucumis sativus
Cucsa.043730 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 440299-442298 Cucumis sativus
Cucsa.043730 2.0kb downstream 2.0kb downstream 5598 true scaffold00542: 442299-447896 Cucumis sativus
Cucsa.043730 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 445897-447896 Cucumis sativus
Cucsa.043730 5.0kb upstream 5.0kb upstream 8598 true scaffold00542: 437299-445896 Cucumis sativus
Cucsa.043730 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 437299-442298 Cucumis sativus
Cucsa.043730 5.0kb downstream 5.0kb downstream 8598 true scaffold00542: 442299-450896 Cucumis sativus
Cucsa.043730 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 445897-450896 Cucumis sativus
Cucsa.043730 10.0kb upstream 10.0kb upstream 13598 true scaffold00542: 432299-445896 Cucumis sativus
Cucsa.043730 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 432299-442298 Cucumis sativus
Cucsa.043730 10.0kb downstream 10.0kb downstream 13598 true scaffold00542: 442299-455896 Cucumis sativus
Cucsa.043730 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 445897-455896 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307056 5265 Fabidae View MSA
124068334 5270 Rosid View MSA
123740517 5271 Pentapetalae View MSA
122792834 5272 Eudicot View MSA
122042824 5273 Angiosperm View MSA
121345155 5274 Embryophyte View MSA
123424719 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain