Gene : Cucsa.043300 C. sativus v1.0
Defline:  (1 of 1) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  28
Name:  ? Cucsa.043300 Secondary Identifier:  ? PAC:16953034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.043300 0.5kb upstream 0.5kb upstream 4265 true scaffold00542: 153221-157485 Cucumis sativus
Cucsa.043300 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 156986-157485 Cucumis sativus
Cucsa.043300 0.5kb downstream 0.5kb downstream 4265 true scaffold00542: 152721-156985 Cucumis sativus
Cucsa.043300 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 152721-153220 Cucumis sativus
Cucsa.043300 1.0kb upstream 1.0kb upstream 4765 true scaffold00542: 153221-157985 Cucumis sativus
Cucsa.043300 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 156986-157985 Cucumis sativus
Cucsa.043300 1.0kb downstream 1.0kb downstream 4765 true scaffold00542: 152221-156985 Cucumis sativus
Cucsa.043300 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 152221-153220 Cucumis sativus
Cucsa.043300 2.0kb upstream 2.0kb upstream 5765 true scaffold00542: 153221-158985 Cucumis sativus
Cucsa.043300 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 156986-158985 Cucumis sativus
Cucsa.043300 2.0kb downstream 2.0kb downstream 5765 true scaffold00542: 151221-156985 Cucumis sativus
Cucsa.043300 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 151221-153220 Cucumis sativus
Cucsa.043300 5.0kb upstream 5.0kb upstream 8765 true scaffold00542: 153221-161985 Cucumis sativus
Cucsa.043300 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 156986-161985 Cucumis sativus
Cucsa.043300 5.0kb downstream 5.0kb downstream 8765 true scaffold00542: 148221-156985 Cucumis sativus
Cucsa.043300 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 148221-153220 Cucumis sativus
Cucsa.043300 10.0kb upstream 10.0kb upstream 13765 true scaffold00542: 153221-166985 Cucumis sativus
Cucsa.043300 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 156986-166985 Cucumis sativus
Cucsa.043300 10.0kb downstream 10.0kb downstream 13765 true scaffold00542: 143221-156985 Cucumis sativus
Cucsa.043300 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 143221-153220 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311985 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain