Gene : Cucsa.043130 C. sativus v1.0
Defline:  (1 of 4) PTHR23070:SF26 - AAA-TYPE ATPASE LIKE PROTEIN Genomic Order:  11
Name:  ? Cucsa.043130 Secondary Identifier:  ? PAC:16952998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.043130 0.5kb upstream 0.5kb upstream 1893 true scaffold00542: 58036-59928 Cucumis sativus
Cucsa.043130 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 58036-58535 Cucumis sativus
Cucsa.043130 0.5kb downstream 0.5kb downstream 1893 true scaffold00542: 58536-60428 Cucumis sativus
Cucsa.043130 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 59929-60428 Cucumis sativus
Cucsa.043130 1.0kb upstream 1.0kb upstream 2393 true scaffold00542: 57536-59928 Cucumis sativus
Cucsa.043130 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 57536-58535 Cucumis sativus
Cucsa.043130 1.0kb downstream 1.0kb downstream 2393 true scaffold00542: 58536-60928 Cucumis sativus
Cucsa.043130 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 59929-60928 Cucumis sativus
Cucsa.043130 2.0kb upstream 2.0kb upstream 3393 true scaffold00542: 56536-59928 Cucumis sativus
Cucsa.043130 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 56536-58535 Cucumis sativus
Cucsa.043130 2.0kb downstream 2.0kb downstream 3393 true scaffold00542: 58536-61928 Cucumis sativus
Cucsa.043130 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 59929-61928 Cucumis sativus
Cucsa.043130 5.0kb upstream 5.0kb upstream 6393 true scaffold00542: 53536-59928 Cucumis sativus
Cucsa.043130 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 53536-58535 Cucumis sativus
Cucsa.043130 5.0kb downstream 5.0kb downstream 6393 true scaffold00542: 58536-64928 Cucumis sativus
Cucsa.043130 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 59929-64928 Cucumis sativus
Cucsa.043130 10.0kb upstream 10.0kb upstream 11393 true scaffold00542: 48536-59928 Cucumis sativus
Cucsa.043130 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 48536-58535 Cucumis sativus
Cucsa.043130 10.0kb downstream 10.0kb downstream 11393 true scaffold00542: 58536-69928 Cucumis sativus
Cucsa.043130 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 59929-69928 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237149 5265 Fabidae View MSA
124074026 5270 Rosid View MSA
123751190 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain