Gene : Cucsa.044980 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  196
Name:  ? Cucsa.044980 Secondary Identifier:  ? PAC:16953291
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.044980 0.5kb upstream 0.5kb upstream 10911 true scaffold00542: 1097846-1108756 Cucumis sativus
Cucsa.044980 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 1097846-1098345 Cucumis sativus
Cucsa.044980 0.5kb downstream 0.5kb downstream 10911 true scaffold00542: 1098346-1109256 Cucumis sativus
Cucsa.044980 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 1108757-1109256 Cucumis sativus
Cucsa.044980 1.0kb upstream 1.0kb upstream 11411 true scaffold00542: 1097346-1108756 Cucumis sativus
Cucsa.044980 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 1097346-1098345 Cucumis sativus
Cucsa.044980 1.0kb downstream 1.0kb downstream 11411 true scaffold00542: 1098346-1109756 Cucumis sativus
Cucsa.044980 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 1108757-1109756 Cucumis sativus
Cucsa.044980 2.0kb upstream 2.0kb upstream 12411 true scaffold00542: 1096346-1108756 Cucumis sativus
Cucsa.044980 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 1096346-1098345 Cucumis sativus
Cucsa.044980 2.0kb downstream 2.0kb downstream 12411 true scaffold00542: 1098346-1110756 Cucumis sativus
Cucsa.044980 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 1108757-1110756 Cucumis sativus
Cucsa.044980 5.0kb upstream 5.0kb upstream 15411 true scaffold00542: 1093346-1108756 Cucumis sativus
Cucsa.044980 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 1093346-1098345 Cucumis sativus
Cucsa.044980 5.0kb downstream 5.0kb downstream 15411 true scaffold00542: 1098346-1113756 Cucumis sativus
Cucsa.044980 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 1108757-1113756 Cucumis sativus
Cucsa.044980 10.0kb upstream 10.0kb upstream 20411 true scaffold00542: 1088346-1108756 Cucumis sativus
Cucsa.044980 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 1088346-1098345 Cucumis sativus
Cucsa.044980 10.0kb downstream 10.0kb downstream 20411 true scaffold00542: 1098346-1118756 Cucumis sativus
Cucsa.044980 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 1108757-1118756 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122306893 5265 Fabidae View MSA
124073421 5270 Rosid View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain