Gene : Cucsa.042580 C. sativus v1.0
Defline:  (1 of 3) PTHR13683:SF286 - ASPARTIC PROTEINASE A1-RELATED Genomic Order:  107
Name:  ? Cucsa.042580 Secondary Identifier:  ? PAC:16952949
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.042580 0.5kb upstream 0.5kb upstream 5724 true scaffold00540: 962666-968389 Cucumis sativus
Cucsa.042580 0.5kb upstream 0.5kb upstream 500 false scaffold00540: 967890-968389 Cucumis sativus
Cucsa.042580 0.5kb downstream 0.5kb downstream 5724 true scaffold00540: 962166-967889 Cucumis sativus
Cucsa.042580 0.5kb downstream 0.5kb downstream 500 false scaffold00540: 962166-962665 Cucumis sativus
Cucsa.042580 1.0kb upstream 1.0kb upstream 6224 true scaffold00540: 962666-968889 Cucumis sativus
Cucsa.042580 1.0kb upstream 1.0kb upstream 1000 false scaffold00540: 967890-968889 Cucumis sativus
Cucsa.042580 1.0kb downstream 1.0kb downstream 6224 true scaffold00540: 961666-967889 Cucumis sativus
Cucsa.042580 1.0kb downstream 1.0kb downstream 1000 false scaffold00540: 961666-962665 Cucumis sativus
Cucsa.042580 2.0kb upstream 2.0kb upstream 7224 true scaffold00540: 962666-969889 Cucumis sativus
Cucsa.042580 2.0kb upstream 2.0kb upstream 2000 false scaffold00540: 967890-969889 Cucumis sativus
Cucsa.042580 2.0kb downstream 2.0kb downstream 7224 true scaffold00540: 960666-967889 Cucumis sativus
Cucsa.042580 2.0kb downstream 2.0kb downstream 2000 false scaffold00540: 960666-962665 Cucumis sativus
Cucsa.042580 5.0kb upstream 5.0kb upstream 10224 true scaffold00540: 962666-972889 Cucumis sativus
Cucsa.042580 5.0kb upstream 5.0kb upstream 5000 false scaffold00540: 967890-972889 Cucumis sativus
Cucsa.042580 5.0kb downstream 5.0kb downstream 10224 true scaffold00540: 957666-967889 Cucumis sativus
Cucsa.042580 5.0kb downstream 5.0kb downstream 5000 false scaffold00540: 957666-962665 Cucumis sativus
Cucsa.042580 10.0kb upstream 10.0kb upstream 15224 true scaffold00540: 962666-977889 Cucumis sativus
Cucsa.042580 10.0kb upstream 10.0kb upstream 10000 false scaffold00540: 967890-977889 Cucumis sativus
Cucsa.042580 10.0kb downstream 10.0kb downstream 15224 true scaffold00540: 952666-967889 Cucumis sativus
Cucsa.042580 10.0kb downstream 10.0kb downstream 10000 false scaffold00540: 952666-962665 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
122312580 5265 Fabidae View MSA
124069001 5270 Rosid View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain