Gene : Cucsa.047280 C. sativus v1.0
Defline:  (1 of 2) PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Genomic Order:  422
Name:  ? Cucsa.047280 Secondary Identifier:  ? PAC:16953638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.047280 0.5kb upstream 0.5kb upstream 7118 true scaffold00542: 2365534-2372651 Cucumis sativus
Cucsa.047280 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 2365534-2366033 Cucumis sativus
Cucsa.047280 0.5kb downstream 0.5kb downstream 7118 true scaffold00542: 2366034-2373151 Cucumis sativus
Cucsa.047280 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 2372652-2373151 Cucumis sativus
Cucsa.047280 1.0kb upstream 1.0kb upstream 7618 true scaffold00542: 2365034-2372651 Cucumis sativus
Cucsa.047280 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 2365034-2366033 Cucumis sativus
Cucsa.047280 1.0kb downstream 1.0kb downstream 7618 true scaffold00542: 2366034-2373651 Cucumis sativus
Cucsa.047280 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 2372652-2373651 Cucumis sativus
Cucsa.047280 2.0kb upstream 2.0kb upstream 8618 true scaffold00542: 2364034-2372651 Cucumis sativus
Cucsa.047280 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 2364034-2366033 Cucumis sativus
Cucsa.047280 2.0kb downstream 2.0kb downstream 8618 true scaffold00542: 2366034-2374651 Cucumis sativus
Cucsa.047280 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 2372652-2374651 Cucumis sativus
Cucsa.047280 5.0kb upstream 5.0kb upstream 11618 true scaffold00542: 2361034-2372651 Cucumis sativus
Cucsa.047280 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 2361034-2366033 Cucumis sativus
Cucsa.047280 5.0kb downstream 5.0kb downstream 11618 true scaffold00542: 2366034-2377651 Cucumis sativus
Cucsa.047280 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 2372652-2377651 Cucumis sativus
Cucsa.047280 10.0kb upstream 10.0kb upstream 16618 true scaffold00542: 2356034-2372651 Cucumis sativus
Cucsa.047280 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 2356034-2366033 Cucumis sativus
Cucsa.047280 10.0kb downstream 10.0kb downstream 16618 true scaffold00542: 2366034-2382651 Cucumis sativus
Cucsa.047280 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 2372652-2382651 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311895 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain