Gene : Cucsa.046750 C. sativus v1.0
Defline:  (1 of 1) PTHR32039:SF9 - MAGNESIUM-CHELATASE SUBUNIT CHLI-2, CHLOROPLASTIC Genomic Order:  371
Name:  ? Cucsa.046750 Secondary Identifier:  ? PAC:16953575
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CHLOROPHYLL-SYN Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.046750 0.5kb upstream 0.5kb upstream 2566 true scaffold00542: 2084688-2087253 Cucumis sativus
Cucsa.046750 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 2086754-2087253 Cucumis sativus
Cucsa.046750 0.5kb downstream 0.5kb downstream 2566 true scaffold00542: 2084188-2086753 Cucumis sativus
Cucsa.046750 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 2084188-2084687 Cucumis sativus
Cucsa.046750 1.0kb upstream 1.0kb upstream 3066 true scaffold00542: 2084688-2087753 Cucumis sativus
Cucsa.046750 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 2086754-2087753 Cucumis sativus
Cucsa.046750 1.0kb downstream 1.0kb downstream 3066 true scaffold00542: 2083688-2086753 Cucumis sativus
Cucsa.046750 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 2083688-2084687 Cucumis sativus
Cucsa.046750 2.0kb upstream 2.0kb upstream 4066 true scaffold00542: 2084688-2088753 Cucumis sativus
Cucsa.046750 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 2086754-2088753 Cucumis sativus
Cucsa.046750 2.0kb downstream 2.0kb downstream 4066 true scaffold00542: 2082688-2086753 Cucumis sativus
Cucsa.046750 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 2082688-2084687 Cucumis sativus
Cucsa.046750 5.0kb upstream 5.0kb upstream 7066 true scaffold00542: 2084688-2091753 Cucumis sativus
Cucsa.046750 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 2086754-2091753 Cucumis sativus
Cucsa.046750 5.0kb downstream 5.0kb downstream 7066 true scaffold00542: 2079688-2086753 Cucumis sativus
Cucsa.046750 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 2079688-2084687 Cucumis sativus
Cucsa.046750 10.0kb upstream 10.0kb upstream 12066 true scaffold00542: 2084688-2096753 Cucumis sativus
Cucsa.046750 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 2086754-2096753 Cucumis sativus
Cucsa.046750 10.0kb downstream 10.0kb downstream 12066 true scaffold00542: 2074688-2086753 Cucumis sativus
Cucsa.046750 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 2074688-2084687 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122313972 5265 Fabidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain