Gene : Cucsa.045150 C. sativus v1.0
Defline:  (1 of 7) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  212
Name:  ? Cucsa.045150 Secondary Identifier:  ? PAC:16953315
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.045150 0.5kb upstream 0.5kb upstream 4965 true scaffold00542: 1188599-1193563 Cucumis sativus
Cucsa.045150 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 1188599-1189098 Cucumis sativus
Cucsa.045150 0.5kb downstream 0.5kb downstream 4965 true scaffold00542: 1189099-1194063 Cucumis sativus
Cucsa.045150 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 1193564-1194063 Cucumis sativus
Cucsa.045150 1.0kb upstream 1.0kb upstream 5465 true scaffold00542: 1188099-1193563 Cucumis sativus
Cucsa.045150 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 1188099-1189098 Cucumis sativus
Cucsa.045150 1.0kb downstream 1.0kb downstream 5465 true scaffold00542: 1189099-1194563 Cucumis sativus
Cucsa.045150 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 1193564-1194563 Cucumis sativus
Cucsa.045150 2.0kb upstream 2.0kb upstream 6465 true scaffold00542: 1187099-1193563 Cucumis sativus
Cucsa.045150 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 1187099-1189098 Cucumis sativus
Cucsa.045150 2.0kb downstream 2.0kb downstream 6465 true scaffold00542: 1189099-1195563 Cucumis sativus
Cucsa.045150 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 1193564-1195563 Cucumis sativus
Cucsa.045150 5.0kb upstream 5.0kb upstream 9465 true scaffold00542: 1184099-1193563 Cucumis sativus
Cucsa.045150 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 1184099-1189098 Cucumis sativus
Cucsa.045150 5.0kb downstream 5.0kb downstream 9465 true scaffold00542: 1189099-1198563 Cucumis sativus
Cucsa.045150 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 1193564-1198563 Cucumis sativus
Cucsa.045150 10.0kb upstream 10.0kb upstream 14465 true scaffold00542: 1179099-1193563 Cucumis sativus
Cucsa.045150 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 1179099-1189098 Cucumis sativus
Cucsa.045150 10.0kb downstream 10.0kb downstream 14465 true scaffold00542: 1189099-1203563 Cucumis sativus
Cucsa.045150 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 1193564-1203563 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791970 5273 Angiosperm View MSA
122237042 5265 Fabidae View MSA
124072399 5270 Rosid View MSA
123745346 5271 Pentapetalae View MSA
122795673 5272 Eudicot View MSA
121063234 5274 Embryophyte View MSA
123102998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain