Gene : Cucsa.044560 C. sativus v1.0
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  154
Name:  ? Cucsa.044560 Secondary Identifier:  ? PAC:16953221
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.044560 0.5kb upstream 0.5kb upstream 1853 true scaffold00542: 857047-858899 Cucumis sativus
Cucsa.044560 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 858400-858899 Cucumis sativus
Cucsa.044560 0.5kb downstream 0.5kb downstream 1853 true scaffold00542: 856547-858399 Cucumis sativus
Cucsa.044560 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 856547-857046 Cucumis sativus
Cucsa.044560 1.0kb upstream 1.0kb upstream 2353 true scaffold00542: 857047-859399 Cucumis sativus
Cucsa.044560 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 858400-859399 Cucumis sativus
Cucsa.044560 1.0kb downstream 1.0kb downstream 2353 true scaffold00542: 856047-858399 Cucumis sativus
Cucsa.044560 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 856047-857046 Cucumis sativus
Cucsa.044560 2.0kb upstream 2.0kb upstream 3353 true scaffold00542: 857047-860399 Cucumis sativus
Cucsa.044560 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 858400-860399 Cucumis sativus
Cucsa.044560 2.0kb downstream 2.0kb downstream 3353 true scaffold00542: 855047-858399 Cucumis sativus
Cucsa.044560 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 855047-857046 Cucumis sativus
Cucsa.044560 5.0kb upstream 5.0kb upstream 6353 true scaffold00542: 857047-863399 Cucumis sativus
Cucsa.044560 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 858400-863399 Cucumis sativus
Cucsa.044560 5.0kb downstream 5.0kb downstream 6353 true scaffold00542: 852047-858399 Cucumis sativus
Cucsa.044560 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 852047-857046 Cucumis sativus
Cucsa.044560 10.0kb upstream 10.0kb upstream 11353 true scaffold00542: 857047-868399 Cucumis sativus
Cucsa.044560 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 858400-868399 Cucumis sativus
Cucsa.044560 10.0kb downstream 10.0kb downstream 11353 true scaffold00542: 847047-858399 Cucumis sativus
Cucsa.044560 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 847047-857046 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306751 5265 Fabidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain