Gene : Cucsa.012520 C. sativus v1.0
Defline:  (1 of 41) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  8
Name:  ? Cucsa.012520 Secondary Identifier:  ? PAC:16951533
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.012520 0.5kb upstream 0.5kb upstream 4464 true scaffold00164: 80869-85332 Cucumis sativus
Cucsa.012520 0.5kb upstream 0.5kb upstream 500 false scaffold00164: 84833-85332 Cucumis sativus
Cucsa.012520 0.5kb downstream 0.5kb downstream 4464 true scaffold00164: 80369-84832 Cucumis sativus
Cucsa.012520 0.5kb downstream 0.5kb downstream 500 false scaffold00164: 80369-80868 Cucumis sativus
Cucsa.012520 1.0kb upstream 1.0kb upstream 4964 true scaffold00164: 80869-85832 Cucumis sativus
Cucsa.012520 1.0kb upstream 1.0kb upstream 1000 false scaffold00164: 84833-85832 Cucumis sativus
Cucsa.012520 1.0kb downstream 1.0kb downstream 4964 true scaffold00164: 79869-84832 Cucumis sativus
Cucsa.012520 1.0kb downstream 1.0kb downstream 1000 false scaffold00164: 79869-80868 Cucumis sativus
Cucsa.012520 2.0kb upstream 2.0kb upstream 5964 true scaffold00164: 80869-86832 Cucumis sativus
Cucsa.012520 2.0kb upstream 2.0kb upstream 2000 false scaffold00164: 84833-86832 Cucumis sativus
Cucsa.012520 2.0kb downstream 2.0kb downstream 5964 true scaffold00164: 78869-84832 Cucumis sativus
Cucsa.012520 2.0kb downstream 2.0kb downstream 2000 false scaffold00164: 78869-80868 Cucumis sativus
Cucsa.012520 5.0kb upstream 5.0kb upstream 8964 true scaffold00164: 80869-89832 Cucumis sativus
Cucsa.012520 5.0kb upstream 5.0kb upstream 5000 false scaffold00164: 84833-89832 Cucumis sativus
Cucsa.012520 5.0kb downstream 5.0kb downstream 8964 true scaffold00164: 75869-84832 Cucumis sativus
Cucsa.012520 5.0kb downstream 5.0kb downstream 5000 false scaffold00164: 75869-80868 Cucumis sativus
Cucsa.012520 10.0kb upstream 10.0kb upstream 13964 true scaffold00164: 80869-94832 Cucumis sativus
Cucsa.012520 10.0kb upstream 10.0kb upstream 10000 false scaffold00164: 84833-94832 Cucumis sativus
Cucsa.012520 10.0kb downstream 10.0kb downstream 13964 true scaffold00164: 70869-84832 Cucumis sativus
Cucsa.012520 10.0kb downstream 10.0kb downstream 10000 false scaffold00164: 70869-80868 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237407 5265 Fabidae View MSA
124074728 5270 Rosid View MSA
123752132 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain