Gene : Cucsa.011380 C. sativus v1.0
Defline:  (1 of 2) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  82
Name:  ? Cucsa.011380 Secondary Identifier:  ? PAC:16951413
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6549 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.011380 0.5kb upstream 0.5kb upstream 7861 true scaffold00154: 638705-646565 Cucumis sativus
Cucsa.011380 0.5kb upstream 0.5kb upstream 500 false scaffold00154: 638705-639204 Cucumis sativus
Cucsa.011380 0.5kb downstream 0.5kb downstream 7861 true scaffold00154: 639205-647065 Cucumis sativus
Cucsa.011380 0.5kb downstream 0.5kb downstream 500 false scaffold00154: 646566-647065 Cucumis sativus
Cucsa.011380 1.0kb upstream 1.0kb upstream 8361 true scaffold00154: 638205-646565 Cucumis sativus
Cucsa.011380 1.0kb upstream 1.0kb upstream 1000 false scaffold00154: 638205-639204 Cucumis sativus
Cucsa.011380 1.0kb downstream 1.0kb downstream 8361 true scaffold00154: 639205-647565 Cucumis sativus
Cucsa.011380 1.0kb downstream 1.0kb downstream 1000 false scaffold00154: 646566-647565 Cucumis sativus
Cucsa.011380 2.0kb upstream 2.0kb upstream 9361 true scaffold00154: 637205-646565 Cucumis sativus
Cucsa.011380 2.0kb upstream 2.0kb upstream 2000 false scaffold00154: 637205-639204 Cucumis sativus
Cucsa.011380 2.0kb downstream 2.0kb downstream 9361 true scaffold00154: 639205-648565 Cucumis sativus
Cucsa.011380 2.0kb downstream 2.0kb downstream 2000 false scaffold00154: 646566-648565 Cucumis sativus
Cucsa.011380 5.0kb upstream 5.0kb upstream 12361 true scaffold00154: 634205-646565 Cucumis sativus
Cucsa.011380 5.0kb upstream 5.0kb upstream 5000 false scaffold00154: 634205-639204 Cucumis sativus
Cucsa.011380 5.0kb downstream 5.0kb downstream 12361 true scaffold00154: 639205-651565 Cucumis sativus
Cucsa.011380 5.0kb downstream 5.0kb downstream 5000 false scaffold00154: 646566-651565 Cucumis sativus
Cucsa.011380 10.0kb upstream 10.0kb upstream 17361 true scaffold00154: 629205-646565 Cucumis sativus
Cucsa.011380 10.0kb upstream 10.0kb upstream 10000 false scaffold00154: 629205-639204 Cucumis sativus
Cucsa.011380 10.0kb downstream 10.0kb downstream 17361 true scaffold00154: 639205-656565 Cucumis sativus
Cucsa.011380 10.0kb downstream 10.0kb downstream 10000 false scaffold00154: 646566-656565 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041513 5273 Angiosperm View MSA
122304433 5265 Fabidae View MSA
124066348 5270 Rosid View MSA
123740516 5271 Pentapetalae View MSA
122791819 5272 Eudicot View MSA
121349846 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain