Gene : Cucsa.010570 C. sativus v1.0
Defline:  (1 of 1) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  1
Name:  ? Cucsa.010570 Secondary Identifier:  ? PAC:16951296
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.010570 0.5kb upstream 0.5kb upstream 7050 true scaffold00154: 688-7737 Cucumis sativus
Cucsa.010570 0.5kb upstream 0.5kb upstream 500 false scaffold00154: 688-1187 Cucumis sativus
Cucsa.010570 0.5kb downstream 0.5kb downstream 7050 true scaffold00154: 1188-8237 Cucumis sativus
Cucsa.010570 0.5kb downstream 0.5kb downstream 500 false scaffold00154: 7738-8237 Cucumis sativus
Cucsa.010570 1.0kb upstream 1.0kb upstream 7550 true scaffold00154: 188-7737 Cucumis sativus
Cucsa.010570 1.0kb upstream 1.0kb upstream 1000 false scaffold00154: 188-1187 Cucumis sativus
Cucsa.010570 1.0kb downstream 1.0kb downstream 7550 true scaffold00154: 1188-8737 Cucumis sativus
Cucsa.010570 1.0kb downstream 1.0kb downstream 1000 false scaffold00154: 7738-8737 Cucumis sativus
Cucsa.010570 2.0kb upstream 2.0kb upstream 7737 true scaffold00154: 1-7737 Cucumis sativus
Cucsa.010570 2.0kb upstream 2.0kb upstream 1187 false scaffold00154: 1-1187 Cucumis sativus
Cucsa.010570 2.0kb downstream 2.0kb downstream 8550 true scaffold00154: 1188-9737 Cucumis sativus
Cucsa.010570 2.0kb downstream 2.0kb downstream 2000 false scaffold00154: 7738-9737 Cucumis sativus
Cucsa.010570 5.0kb upstream 5.0kb upstream 7737 true scaffold00154: 1-7737 Cucumis sativus
Cucsa.010570 5.0kb upstream 5.0kb upstream 1187 false scaffold00154: 1-1187 Cucumis sativus
Cucsa.010570 5.0kb downstream 5.0kb downstream 11550 true scaffold00154: 1188-12737 Cucumis sativus
Cucsa.010570 5.0kb downstream 5.0kb downstream 5000 false scaffold00154: 7738-12737 Cucumis sativus
Cucsa.010570 10.0kb upstream 10.0kb upstream 7737 true scaffold00154: 1-7737 Cucumis sativus
Cucsa.010570 10.0kb upstream 10.0kb upstream 1187 false scaffold00154: 1-1187 Cucumis sativus
Cucsa.010570 10.0kb downstream 10.0kb downstream 16550 true scaffold00154: 1188-17737 Cucumis sativus
Cucsa.010570 10.0kb downstream 10.0kb downstream 10000 false scaffold00154: 7738-17737 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303367 5265 Fabidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain