Gene : Cucsa.010780 C. sativus v1.0
Defline:  (1 of 5) PTHR13871:SF51 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  22
Name:  ? Cucsa.010780 Secondary Identifier:  ? PAC:16951325
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7039 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.010780 0.5kb upstream 0.5kb upstream 1259 true scaffold00154: 183809-185067 Cucumis sativus
Cucsa.010780 0.5kb upstream 0.5kb upstream 500 false scaffold00154: 184568-185067 Cucumis sativus
Cucsa.010780 0.5kb downstream 0.5kb downstream 1259 true scaffold00154: 183309-184567 Cucumis sativus
Cucsa.010780 0.5kb downstream 0.5kb downstream 500 false scaffold00154: 183309-183808 Cucumis sativus
Cucsa.010780 1.0kb upstream 1.0kb upstream 1759 true scaffold00154: 183809-185567 Cucumis sativus
Cucsa.010780 1.0kb upstream 1.0kb upstream 1000 false scaffold00154: 184568-185567 Cucumis sativus
Cucsa.010780 1.0kb downstream 1.0kb downstream 1759 true scaffold00154: 182809-184567 Cucumis sativus
Cucsa.010780 1.0kb downstream 1.0kb downstream 1000 false scaffold00154: 182809-183808 Cucumis sativus
Cucsa.010780 2.0kb upstream 2.0kb upstream 2759 true scaffold00154: 183809-186567 Cucumis sativus
Cucsa.010780 2.0kb upstream 2.0kb upstream 2000 false scaffold00154: 184568-186567 Cucumis sativus
Cucsa.010780 2.0kb downstream 2.0kb downstream 2759 true scaffold00154: 181809-184567 Cucumis sativus
Cucsa.010780 2.0kb downstream 2.0kb downstream 2000 false scaffold00154: 181809-183808 Cucumis sativus
Cucsa.010780 5.0kb upstream 5.0kb upstream 5759 true scaffold00154: 183809-189567 Cucumis sativus
Cucsa.010780 5.0kb upstream 5.0kb upstream 5000 false scaffold00154: 184568-189567 Cucumis sativus
Cucsa.010780 5.0kb downstream 5.0kb downstream 5759 true scaffold00154: 178809-184567 Cucumis sativus
Cucsa.010780 5.0kb downstream 5.0kb downstream 5000 false scaffold00154: 178809-183808 Cucumis sativus
Cucsa.010780 10.0kb upstream 10.0kb upstream 10759 true scaffold00154: 183809-194567 Cucumis sativus
Cucsa.010780 10.0kb upstream 10.0kb upstream 10000 false scaffold00154: 184568-194567 Cucumis sativus
Cucsa.010780 10.0kb downstream 10.0kb downstream 10759 true scaffold00154: 173809-184567 Cucumis sativus
Cucsa.010780 10.0kb downstream 10.0kb downstream 10000 false scaffold00154: 173809-183808 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300166 5265 Fabidae View MSA
124074302 5270 Rosid View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain