Gene : Cucsa.005270 C. sativus v1.0
Defline:  (1 of 6) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) Genomic Order:  35
Name:  ? Cucsa.005270 Secondary Identifier:  ? PAC:16951115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.005270 0.5kb upstream 0.5kb upstream 9268 true scaffold00055: 331841-341108 Cucumis sativus
Cucsa.005270 0.5kb upstream 0.5kb upstream 500 false scaffold00055: 340609-341108 Cucumis sativus
Cucsa.005270 0.5kb downstream 0.5kb downstream 9268 true scaffold00055: 331341-340608 Cucumis sativus
Cucsa.005270 0.5kb downstream 0.5kb downstream 500 false scaffold00055: 331341-331840 Cucumis sativus
Cucsa.005270 1.0kb upstream 1.0kb upstream 9768 true scaffold00055: 331841-341608 Cucumis sativus
Cucsa.005270 1.0kb upstream 1.0kb upstream 1000 false scaffold00055: 340609-341608 Cucumis sativus
Cucsa.005270 1.0kb downstream 1.0kb downstream 9768 true scaffold00055: 330841-340608 Cucumis sativus
Cucsa.005270 1.0kb downstream 1.0kb downstream 1000 false scaffold00055: 330841-331840 Cucumis sativus
Cucsa.005270 2.0kb upstream 2.0kb upstream 10768 true scaffold00055: 331841-342608 Cucumis sativus
Cucsa.005270 2.0kb upstream 2.0kb upstream 2000 false scaffold00055: 340609-342608 Cucumis sativus
Cucsa.005270 2.0kb downstream 2.0kb downstream 10768 true scaffold00055: 329841-340608 Cucumis sativus
Cucsa.005270 2.0kb downstream 2.0kb downstream 2000 false scaffold00055: 329841-331840 Cucumis sativus
Cucsa.005270 5.0kb upstream 5.0kb upstream 13768 true scaffold00055: 331841-345608 Cucumis sativus
Cucsa.005270 5.0kb upstream 5.0kb upstream 5000 false scaffold00055: 340609-345608 Cucumis sativus
Cucsa.005270 5.0kb downstream 5.0kb downstream 13768 true scaffold00055: 326841-340608 Cucumis sativus
Cucsa.005270 5.0kb downstream 5.0kb downstream 5000 false scaffold00055: 326841-331840 Cucumis sativus
Cucsa.005270 10.0kb upstream 10.0kb upstream 18768 true scaffold00055: 331841-350608 Cucumis sativus
Cucsa.005270 10.0kb upstream 10.0kb upstream 10000 false scaffold00055: 340609-350608 Cucumis sativus
Cucsa.005270 10.0kb downstream 10.0kb downstream 18768 true scaffold00055: 321841-340608 Cucumis sativus
Cucsa.005270 10.0kb downstream 10.0kb downstream 10000 false scaffold00055: 321841-331840 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314602 5265 Fabidae View MSA
124065474 5270 Rosid View MSA
123753453 5271 Pentapetalae View MSA
122797686 5272 Eudicot View MSA
122043296 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350049 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain