Gene : Cucsa.005180 C. sativus v1.0
Defline:  (1 of 1) PTHR23315:SF57 - ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN Genomic Order:  27
Name:  ? Cucsa.005180 Secondary Identifier:  ? PAC:16951098
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.005180 0.5kb upstream 0.5kb upstream 2147 true scaffold00055: 271857-274003 Cucumis sativus
Cucsa.005180 0.5kb upstream 0.5kb upstream 500 false scaffold00055: 273504-274003 Cucumis sativus
Cucsa.005180 0.5kb downstream 0.5kb downstream 2147 true scaffold00055: 271357-273503 Cucumis sativus
Cucsa.005180 0.5kb downstream 0.5kb downstream 500 false scaffold00055: 271357-271856 Cucumis sativus
Cucsa.005180 1.0kb upstream 1.0kb upstream 2647 true scaffold00055: 271857-274503 Cucumis sativus
Cucsa.005180 1.0kb upstream 1.0kb upstream 1000 false scaffold00055: 273504-274503 Cucumis sativus
Cucsa.005180 1.0kb downstream 1.0kb downstream 2647 true scaffold00055: 270857-273503 Cucumis sativus
Cucsa.005180 1.0kb downstream 1.0kb downstream 1000 false scaffold00055: 270857-271856 Cucumis sativus
Cucsa.005180 2.0kb upstream 2.0kb upstream 3647 true scaffold00055: 271857-275503 Cucumis sativus
Cucsa.005180 2.0kb upstream 2.0kb upstream 2000 false scaffold00055: 273504-275503 Cucumis sativus
Cucsa.005180 2.0kb downstream 2.0kb downstream 3647 true scaffold00055: 269857-273503 Cucumis sativus
Cucsa.005180 2.0kb downstream 2.0kb downstream 2000 false scaffold00055: 269857-271856 Cucumis sativus
Cucsa.005180 5.0kb upstream 5.0kb upstream 6647 true scaffold00055: 271857-278503 Cucumis sativus
Cucsa.005180 5.0kb upstream 5.0kb upstream 5000 false scaffold00055: 273504-278503 Cucumis sativus
Cucsa.005180 5.0kb downstream 5.0kb downstream 6647 true scaffold00055: 266857-273503 Cucumis sativus
Cucsa.005180 5.0kb downstream 5.0kb downstream 5000 false scaffold00055: 266857-271856 Cucumis sativus
Cucsa.005180 10.0kb upstream 10.0kb upstream 11647 true scaffold00055: 271857-283503 Cucumis sativus
Cucsa.005180 10.0kb upstream 10.0kb upstream 10000 false scaffold00055: 273504-283503 Cucumis sativus
Cucsa.005180 10.0kb downstream 10.0kb downstream 11647 true scaffold00055: 261857-273503 Cucumis sativus
Cucsa.005180 10.0kb downstream 10.0kb downstream 10000 false scaffold00055: 261857-271856 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041030 5273 Angiosperm View MSA
122306827 5265 Fabidae View MSA
124068781 5270 Rosid View MSA
123739255 5271 Pentapetalae View MSA
122793405 5272 Eudicot View MSA
121346136 5274 Embryophyte View MSA
123380335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain