Gene : Cucsa.004640 C. sativus v1.0
Defline:  (1 of 1) PTHR32370:SF16 - NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN Genomic Order:  22
Name:  ? Cucsa.004640 Secondary Identifier:  ? PAC:16951038
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.004640 0.5kb upstream 0.5kb upstream 3042 true scaffold00053: 165849-168890 Cucumis sativus
Cucsa.004640 0.5kb upstream 0.5kb upstream 500 false scaffold00053: 168391-168890 Cucumis sativus
Cucsa.004640 0.5kb downstream 0.5kb downstream 3042 true scaffold00053: 165349-168390 Cucumis sativus
Cucsa.004640 0.5kb downstream 0.5kb downstream 500 false scaffold00053: 165349-165848 Cucumis sativus
Cucsa.004640 1.0kb upstream 1.0kb upstream 3542 true scaffold00053: 165849-169390 Cucumis sativus
Cucsa.004640 1.0kb upstream 1.0kb upstream 1000 false scaffold00053: 168391-169390 Cucumis sativus
Cucsa.004640 1.0kb downstream 1.0kb downstream 3542 true scaffold00053: 164849-168390 Cucumis sativus
Cucsa.004640 1.0kb downstream 1.0kb downstream 1000 false scaffold00053: 164849-165848 Cucumis sativus
Cucsa.004640 2.0kb upstream 2.0kb upstream 4542 true scaffold00053: 165849-170390 Cucumis sativus
Cucsa.004640 2.0kb upstream 2.0kb upstream 2000 false scaffold00053: 168391-170390 Cucumis sativus
Cucsa.004640 2.0kb downstream 2.0kb downstream 4542 true scaffold00053: 163849-168390 Cucumis sativus
Cucsa.004640 2.0kb downstream 2.0kb downstream 2000 false scaffold00053: 163849-165848 Cucumis sativus
Cucsa.004640 5.0kb upstream 5.0kb upstream 7542 true scaffold00053: 165849-173390 Cucumis sativus
Cucsa.004640 5.0kb upstream 5.0kb upstream 5000 false scaffold00053: 168391-173390 Cucumis sativus
Cucsa.004640 5.0kb downstream 5.0kb downstream 7542 true scaffold00053: 160849-168390 Cucumis sativus
Cucsa.004640 5.0kb downstream 5.0kb downstream 5000 false scaffold00053: 160849-165848 Cucumis sativus
Cucsa.004640 10.0kb upstream 10.0kb upstream 12542 true scaffold00053: 165849-178390 Cucumis sativus
Cucsa.004640 10.0kb upstream 10.0kb upstream 10000 false scaffold00053: 168391-178390 Cucumis sativus
Cucsa.004640 10.0kb downstream 10.0kb downstream 12542 true scaffold00053: 155849-168390 Cucumis sativus
Cucsa.004640 10.0kb downstream 10.0kb downstream 10000 false scaffold00053: 155849-165848 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313686 5265 Fabidae View MSA
124065820 5270 Rosid View MSA
123742198 5271 Pentapetalae View MSA
122787661 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain