Gene : Cucsa.041640 C. sativus v1.0
Defline:  (1 of 1) PTHR12780 - RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED Genomic Order:  17
Name:  ? Cucsa.041640 Secondary Identifier:  ? PAC:16952809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.041640 0.5kb upstream 0.5kb upstream 3261 true scaffold00540: 218716-221976 Cucumis sativus
Cucsa.041640 0.5kb upstream 0.5kb upstream 500 false scaffold00540: 218716-219215 Cucumis sativus
Cucsa.041640 0.5kb downstream 0.5kb downstream 3261 true scaffold00540: 219216-222476 Cucumis sativus
Cucsa.041640 0.5kb downstream 0.5kb downstream 500 false scaffold00540: 221977-222476 Cucumis sativus
Cucsa.041640 1.0kb upstream 1.0kb upstream 3761 true scaffold00540: 218216-221976 Cucumis sativus
Cucsa.041640 1.0kb upstream 1.0kb upstream 1000 false scaffold00540: 218216-219215 Cucumis sativus
Cucsa.041640 1.0kb downstream 1.0kb downstream 3761 true scaffold00540: 219216-222976 Cucumis sativus
Cucsa.041640 1.0kb downstream 1.0kb downstream 1000 false scaffold00540: 221977-222976 Cucumis sativus
Cucsa.041640 2.0kb upstream 2.0kb upstream 4761 true scaffold00540: 217216-221976 Cucumis sativus
Cucsa.041640 2.0kb upstream 2.0kb upstream 2000 false scaffold00540: 217216-219215 Cucumis sativus
Cucsa.041640 2.0kb downstream 2.0kb downstream 4761 true scaffold00540: 219216-223976 Cucumis sativus
Cucsa.041640 2.0kb downstream 2.0kb downstream 2000 false scaffold00540: 221977-223976 Cucumis sativus
Cucsa.041640 5.0kb upstream 5.0kb upstream 7761 true scaffold00540: 214216-221976 Cucumis sativus
Cucsa.041640 5.0kb upstream 5.0kb upstream 5000 false scaffold00540: 214216-219215 Cucumis sativus
Cucsa.041640 5.0kb downstream 5.0kb downstream 7761 true scaffold00540: 219216-226976 Cucumis sativus
Cucsa.041640 5.0kb downstream 5.0kb downstream 5000 false scaffold00540: 221977-226976 Cucumis sativus
Cucsa.041640 10.0kb upstream 10.0kb upstream 12761 true scaffold00540: 209216-221976 Cucumis sativus
Cucsa.041640 10.0kb upstream 10.0kb upstream 10000 false scaffold00540: 209216-219215 Cucumis sativus
Cucsa.041640 10.0kb downstream 10.0kb downstream 12761 true scaffold00540: 219216-231976 Cucumis sativus
Cucsa.041640 10.0kb downstream 10.0kb downstream 10000 false scaffold00540: 221977-231976 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306479 5265 Fabidae View MSA
124066352 5270 Rosid View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain