Gene : Cucsa.040670 C. sativus v1.0
Defline:  (1 of 1) PTHR12786:SF2 - SPLICING FACTOR 3A SUBUNIT 3 Genomic Order:  8
Name:  ? Cucsa.040670 Secondary Identifier:  ? PAC:16952778
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.040670 0.5kb upstream 0.5kb upstream 9070 true scaffold00529: 119532-128601 Cucumis sativus
Cucsa.040670 0.5kb upstream 0.5kb upstream 500 false scaffold00529: 119532-120031 Cucumis sativus
Cucsa.040670 0.5kb downstream 0.5kb downstream 9070 true scaffold00529: 120032-129101 Cucumis sativus
Cucsa.040670 0.5kb downstream 0.5kb downstream 500 false scaffold00529: 128602-129101 Cucumis sativus
Cucsa.040670 1.0kb upstream 1.0kb upstream 9570 true scaffold00529: 119032-128601 Cucumis sativus
Cucsa.040670 1.0kb upstream 1.0kb upstream 1000 false scaffold00529: 119032-120031 Cucumis sativus
Cucsa.040670 1.0kb downstream 1.0kb downstream 9570 true scaffold00529: 120032-129601 Cucumis sativus
Cucsa.040670 1.0kb downstream 1.0kb downstream 1000 false scaffold00529: 128602-129601 Cucumis sativus
Cucsa.040670 2.0kb upstream 2.0kb upstream 10570 true scaffold00529: 118032-128601 Cucumis sativus
Cucsa.040670 2.0kb upstream 2.0kb upstream 2000 false scaffold00529: 118032-120031 Cucumis sativus
Cucsa.040670 2.0kb downstream 2.0kb downstream 10570 true scaffold00529: 120032-130601 Cucumis sativus
Cucsa.040670 2.0kb downstream 2.0kb downstream 2000 false scaffold00529: 128602-130601 Cucumis sativus
Cucsa.040670 5.0kb upstream 5.0kb upstream 13570 true scaffold00529: 115032-128601 Cucumis sativus
Cucsa.040670 5.0kb upstream 5.0kb upstream 5000 false scaffold00529: 115032-120031 Cucumis sativus
Cucsa.040670 5.0kb downstream 5.0kb downstream 13570 true scaffold00529: 120032-133601 Cucumis sativus
Cucsa.040670 5.0kb downstream 5.0kb downstream 5000 false scaffold00529: 128602-133601 Cucumis sativus
Cucsa.040670 10.0kb upstream 10.0kb upstream 18570 true scaffold00529: 110032-128601 Cucumis sativus
Cucsa.040670 10.0kb upstream 10.0kb upstream 10000 false scaffold00529: 110032-120031 Cucumis sativus
Cucsa.040670 10.0kb downstream 10.0kb downstream 16374 true scaffold00529: 120032-136405 Cucumis sativus
Cucsa.040670 10.0kb downstream 10.0kb downstream 7804 false scaffold00529: 128602-136405 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306604 5265 Fabidae View MSA
124061347 5270 Rosid View MSA
123747659 5271 Pentapetalae View MSA
122793662 5272 Eudicot View MSA
122042756 5273 Angiosperm View MSA
123429134 5275 Viridiplantae View MSA
121345552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain