Gene : Cucsa.037120 C. sativus v1.0
Defline:  (1 of 1) KOG4362 - Transcriptional regulator BRCA1 Genomic Order:  11
Name:  ? Cucsa.037120 Secondary Identifier:  ? PAC:16952697
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.037120 0.5kb upstream 0.5kb upstream 6025 true scaffold00476: 70820-76844 Cucumis sativus
Cucsa.037120 0.5kb upstream 0.5kb upstream 500 false scaffold00476: 76345-76844 Cucumis sativus
Cucsa.037120 0.5kb downstream 0.5kb downstream 6025 true scaffold00476: 70320-76344 Cucumis sativus
Cucsa.037120 0.5kb downstream 0.5kb downstream 500 false scaffold00476: 70320-70819 Cucumis sativus
Cucsa.037120 1.0kb upstream 1.0kb upstream 6525 true scaffold00476: 70820-77344 Cucumis sativus
Cucsa.037120 1.0kb upstream 1.0kb upstream 1000 false scaffold00476: 76345-77344 Cucumis sativus
Cucsa.037120 1.0kb downstream 1.0kb downstream 6525 true scaffold00476: 69820-76344 Cucumis sativus
Cucsa.037120 1.0kb downstream 1.0kb downstream 1000 false scaffold00476: 69820-70819 Cucumis sativus
Cucsa.037120 2.0kb upstream 2.0kb upstream 7525 true scaffold00476: 70820-78344 Cucumis sativus
Cucsa.037120 2.0kb upstream 2.0kb upstream 2000 false scaffold00476: 76345-78344 Cucumis sativus
Cucsa.037120 2.0kb downstream 2.0kb downstream 7525 true scaffold00476: 68820-76344 Cucumis sativus
Cucsa.037120 2.0kb downstream 2.0kb downstream 2000 false scaffold00476: 68820-70819 Cucumis sativus
Cucsa.037120 5.0kb upstream 5.0kb upstream 10525 true scaffold00476: 70820-81344 Cucumis sativus
Cucsa.037120 5.0kb upstream 5.0kb upstream 5000 false scaffold00476: 76345-81344 Cucumis sativus
Cucsa.037120 5.0kb downstream 5.0kb downstream 10525 true scaffold00476: 65820-76344 Cucumis sativus
Cucsa.037120 5.0kb downstream 5.0kb downstream 5000 false scaffold00476: 65820-70819 Cucumis sativus
Cucsa.037120 10.0kb upstream 10.0kb upstream 15525 true scaffold00476: 70820-86344 Cucumis sativus
Cucsa.037120 10.0kb upstream 10.0kb upstream 10000 false scaffold00476: 76345-86344 Cucumis sativus
Cucsa.037120 10.0kb downstream 10.0kb downstream 15525 true scaffold00476: 60820-76344 Cucumis sativus
Cucsa.037120 10.0kb downstream 10.0kb downstream 10000 false scaffold00476: 60820-70819 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300162 5265 Fabidae View MSA
124074324 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain