Gene : Cucsa.025280 C. sativus v1.0
Defline:  (1 of 2) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  17
Name:  ? Cucsa.025280 Secondary Identifier:  ? PAC:16952025
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLUCONEO-PWY Cucumis sativus pathologic  
Csativus GLYOXYLATE-BYPASS Cucumis sativus pathologic  
Csativus PWY-5464 Cucumis sativus pathologic  
Csativus PWY-561 Cucumis sativus pathologic  
Csativus PWY-5690 Cucumis sativus pathologic  
Csativus PWY-7115 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.025280 0.5kb upstream 0.5kb upstream 3063 true scaffold00345: 135661-138723 Cucumis sativus
Cucsa.025280 0.5kb upstream 0.5kb upstream 500 false scaffold00345: 135661-136160 Cucumis sativus
Cucsa.025280 0.5kb downstream 0.5kb downstream 3063 true scaffold00345: 136161-139223 Cucumis sativus
Cucsa.025280 0.5kb downstream 0.5kb downstream 500 false scaffold00345: 138724-139223 Cucumis sativus
Cucsa.025280 1.0kb upstream 1.0kb upstream 3563 true scaffold00345: 135161-138723 Cucumis sativus
Cucsa.025280 1.0kb upstream 1.0kb upstream 1000 false scaffold00345: 135161-136160 Cucumis sativus
Cucsa.025280 1.0kb downstream 1.0kb downstream 3563 true scaffold00345: 136161-139723 Cucumis sativus
Cucsa.025280 1.0kb downstream 1.0kb downstream 1000 false scaffold00345: 138724-139723 Cucumis sativus
Cucsa.025280 2.0kb upstream 2.0kb upstream 4563 true scaffold00345: 134161-138723 Cucumis sativus
Cucsa.025280 2.0kb upstream 2.0kb upstream 2000 false scaffold00345: 134161-136160 Cucumis sativus
Cucsa.025280 2.0kb downstream 2.0kb downstream 4563 true scaffold00345: 136161-140723 Cucumis sativus
Cucsa.025280 2.0kb downstream 2.0kb downstream 2000 false scaffold00345: 138724-140723 Cucumis sativus
Cucsa.025280 5.0kb upstream 5.0kb upstream 7563 true scaffold00345: 131161-138723 Cucumis sativus
Cucsa.025280 5.0kb upstream 5.0kb upstream 5000 false scaffold00345: 131161-136160 Cucumis sativus
Cucsa.025280 5.0kb downstream 5.0kb downstream 7563 true scaffold00345: 136161-143723 Cucumis sativus
Cucsa.025280 5.0kb downstream 5.0kb downstream 5000 false scaffold00345: 138724-143723 Cucumis sativus
Cucsa.025280 10.0kb upstream 10.0kb upstream 12563 true scaffold00345: 126161-138723 Cucumis sativus
Cucsa.025280 10.0kb upstream 10.0kb upstream 10000 false scaffold00345: 126161-136160 Cucumis sativus
Cucsa.025280 10.0kb downstream 10.0kb downstream 12563 true scaffold00345: 136161-148723 Cucumis sativus
Cucsa.025280 10.0kb downstream 10.0kb downstream 10000 false scaffold00345: 138724-148723 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313004 5265 Fabidae View MSA
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain