Gene : Cucsa.025200 C. sativus v1.0
Defline:  (1 of 1) PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  9
Name:  ? Cucsa.025200 Secondary Identifier:  ? PAC:16952017
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.025200 0.5kb upstream 0.5kb upstream 4671 true scaffold00345: 75792-80462 Cucumis sativus
Cucsa.025200 0.5kb upstream 0.5kb upstream 500 false scaffold00345: 79963-80462 Cucumis sativus
Cucsa.025200 0.5kb downstream 0.5kb downstream 4671 true scaffold00345: 75292-79962 Cucumis sativus
Cucsa.025200 0.5kb downstream 0.5kb downstream 500 false scaffold00345: 75292-75791 Cucumis sativus
Cucsa.025200 1.0kb upstream 1.0kb upstream 5171 true scaffold00345: 75792-80962 Cucumis sativus
Cucsa.025200 1.0kb upstream 1.0kb upstream 1000 false scaffold00345: 79963-80962 Cucumis sativus
Cucsa.025200 1.0kb downstream 1.0kb downstream 5171 true scaffold00345: 74792-79962 Cucumis sativus
Cucsa.025200 1.0kb downstream 1.0kb downstream 1000 false scaffold00345: 74792-75791 Cucumis sativus
Cucsa.025200 2.0kb upstream 2.0kb upstream 6171 true scaffold00345: 75792-81962 Cucumis sativus
Cucsa.025200 2.0kb upstream 2.0kb upstream 2000 false scaffold00345: 79963-81962 Cucumis sativus
Cucsa.025200 2.0kb downstream 2.0kb downstream 6171 true scaffold00345: 73792-79962 Cucumis sativus
Cucsa.025200 2.0kb downstream 2.0kb downstream 2000 false scaffold00345: 73792-75791 Cucumis sativus
Cucsa.025200 5.0kb upstream 5.0kb upstream 9171 true scaffold00345: 75792-84962 Cucumis sativus
Cucsa.025200 5.0kb upstream 5.0kb upstream 5000 false scaffold00345: 79963-84962 Cucumis sativus
Cucsa.025200 5.0kb downstream 5.0kb downstream 9171 true scaffold00345: 70792-79962 Cucumis sativus
Cucsa.025200 5.0kb downstream 5.0kb downstream 5000 false scaffold00345: 70792-75791 Cucumis sativus
Cucsa.025200 10.0kb upstream 10.0kb upstream 14171 true scaffold00345: 75792-89962 Cucumis sativus
Cucsa.025200 10.0kb upstream 10.0kb upstream 10000 false scaffold00345: 79963-89962 Cucumis sativus
Cucsa.025200 10.0kb downstream 10.0kb downstream 14171 true scaffold00345: 65792-79962 Cucumis sativus
Cucsa.025200 10.0kb downstream 10.0kb downstream 10000 false scaffold00345: 65792-75791 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309322 5265 Fabidae View MSA
124050337 5270 Rosid View MSA
123740873 5271 Pentapetalae View MSA
122769993 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain