Gene : Cucsa.080350 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1
Name:  ? Cucsa.080350 Secondary Identifier:  ? PAC:16956290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.080350 0.5kb upstream 0.5kb upstream 748 true scaffold00808: 1-748 Cucumis sativus
Cucsa.080350 0.5kb upstream 0.5kb upstream 18 false scaffold00808: 1-18 Cucumis sativus
Cucsa.080350 0.5kb downstream 0.5kb downstream 1230 true scaffold00808: 19-1248 Cucumis sativus
Cucsa.080350 0.5kb downstream 0.5kb downstream 500 false scaffold00808: 749-1248 Cucumis sativus
Cucsa.080350 1.0kb upstream 1.0kb upstream 748 true scaffold00808: 1-748 Cucumis sativus
Cucsa.080350 1.0kb upstream 1.0kb upstream 18 false scaffold00808: 1-18 Cucumis sativus
Cucsa.080350 1.0kb downstream 1.0kb downstream 1291 true scaffold00808: 19-1309 Cucumis sativus
Cucsa.080350 1.0kb downstream 1.0kb downstream 561 false scaffold00808: 749-1309 Cucumis sativus
Cucsa.080350 2.0kb upstream 2.0kb upstream 748 true scaffold00808: 1-748 Cucumis sativus
Cucsa.080350 2.0kb upstream 2.0kb upstream 18 false scaffold00808: 1-18 Cucumis sativus
Cucsa.080350 2.0kb downstream 2.0kb downstream 1291 true scaffold00808: 19-1309 Cucumis sativus
Cucsa.080350 2.0kb downstream 2.0kb downstream 561 false scaffold00808: 749-1309 Cucumis sativus
Cucsa.080350 5.0kb upstream 5.0kb upstream 748 true scaffold00808: 1-748 Cucumis sativus
Cucsa.080350 5.0kb upstream 5.0kb upstream 18 false scaffold00808: 1-18 Cucumis sativus
Cucsa.080350 5.0kb downstream 5.0kb downstream 1291 true scaffold00808: 19-1309 Cucumis sativus
Cucsa.080350 5.0kb downstream 5.0kb downstream 561 false scaffold00808: 749-1309 Cucumis sativus
Cucsa.080350 10.0kb upstream 10.0kb upstream 748 true scaffold00808: 1-748 Cucumis sativus
Cucsa.080350 10.0kb upstream 10.0kb upstream 18 false scaffold00808: 1-18 Cucumis sativus
Cucsa.080350 10.0kb downstream 10.0kb downstream 1291 true scaffold00808: 19-1309 Cucumis sativus
Cucsa.080350 10.0kb downstream 10.0kb downstream 561 false scaffold00808: 749-1309 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602345 5273 Angiosperm Singleton cluster - no MSA
122232587 5265 Fabidae Singleton cluster - no MSA
123978820 5270 Rosid Singleton cluster - no MSA
123554497 5271 Pentapetalae Singleton cluster - no MSA
122589311 5272 Eudicot Singleton cluster - no MSA
120874636 5274 Embryophyte Singleton cluster - no MSA
122915527 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain