Gene : Cucsa.079490 C. sativus v1.0
Defline:  (1 of 2) PF00078//PF03372 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) Genomic Order:  161
Name:  ? Cucsa.079490 Secondary Identifier:  ? PAC:16956222
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.079490 0.5kb upstream 0.5kb upstream 2875 true scaffold00793: 2353669-2356543 Cucumis sativus
Cucsa.079490 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 2353669-2354168 Cucumis sativus
Cucsa.079490 0.5kb downstream 0.5kb downstream 2875 true scaffold00793: 2354169-2357043 Cucumis sativus
Cucsa.079490 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 2356544-2357043 Cucumis sativus
Cucsa.079490 1.0kb upstream 1.0kb upstream 3375 true scaffold00793: 2353169-2356543 Cucumis sativus
Cucsa.079490 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 2353169-2354168 Cucumis sativus
Cucsa.079490 1.0kb downstream 1.0kb downstream 3375 true scaffold00793: 2354169-2357543 Cucumis sativus
Cucsa.079490 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 2356544-2357543 Cucumis sativus
Cucsa.079490 2.0kb upstream 2.0kb upstream 4375 true scaffold00793: 2352169-2356543 Cucumis sativus
Cucsa.079490 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 2352169-2354168 Cucumis sativus
Cucsa.079490 2.0kb downstream 2.0kb downstream 4375 true scaffold00793: 2354169-2358543 Cucumis sativus
Cucsa.079490 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 2356544-2358543 Cucumis sativus
Cucsa.079490 5.0kb upstream 5.0kb upstream 7375 true scaffold00793: 2349169-2356543 Cucumis sativus
Cucsa.079490 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 2349169-2354168 Cucumis sativus
Cucsa.079490 5.0kb downstream 5.0kb downstream 7375 true scaffold00793: 2354169-2361543 Cucumis sativus
Cucsa.079490 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 2356544-2361543 Cucumis sativus
Cucsa.079490 10.0kb upstream 10.0kb upstream 12375 true scaffold00793: 2344169-2356543 Cucumis sativus
Cucsa.079490 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 2344169-2354168 Cucumis sativus
Cucsa.079490 10.0kb downstream 10.0kb downstream 12375 true scaffold00793: 2354169-2366543 Cucumis sativus
Cucsa.079490 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 2356544-2366543 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315345 5265 Fabidae View MSA
124074258 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain