Gene : Cucsa.079660 C. sativus v1.0
Defline:  (1 of 4) PTHR36319:SF1 - PROTEIN GIGANTEA Genomic Order:  177
Name:  ? Cucsa.079660 Secondary Identifier:  ? PAC:16956245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.079660 0.5kb upstream 0.5kb upstream 1045 true scaffold00793: 2538291-2539335 Cucumis sativus
Cucsa.079660 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 2538836-2539335 Cucumis sativus
Cucsa.079660 0.5kb downstream 0.5kb downstream 1045 true scaffold00793: 2537791-2538835 Cucumis sativus
Cucsa.079660 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 2537791-2538290 Cucumis sativus
Cucsa.079660 1.0kb upstream 1.0kb upstream 1545 true scaffold00793: 2538291-2539835 Cucumis sativus
Cucsa.079660 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 2538836-2539835 Cucumis sativus
Cucsa.079660 1.0kb downstream 1.0kb downstream 1545 true scaffold00793: 2537291-2538835 Cucumis sativus
Cucsa.079660 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 2537291-2538290 Cucumis sativus
Cucsa.079660 2.0kb upstream 2.0kb upstream 2545 true scaffold00793: 2538291-2540835 Cucumis sativus
Cucsa.079660 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 2538836-2540835 Cucumis sativus
Cucsa.079660 2.0kb downstream 2.0kb downstream 2545 true scaffold00793: 2536291-2538835 Cucumis sativus
Cucsa.079660 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 2536291-2538290 Cucumis sativus
Cucsa.079660 5.0kb upstream 5.0kb upstream 5545 true scaffold00793: 2538291-2543835 Cucumis sativus
Cucsa.079660 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 2538836-2543835 Cucumis sativus
Cucsa.079660 5.0kb downstream 5.0kb downstream 5545 true scaffold00793: 2533291-2538835 Cucumis sativus
Cucsa.079660 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 2533291-2538290 Cucumis sativus
Cucsa.079660 10.0kb upstream 10.0kb upstream 10545 true scaffold00793: 2538291-2548835 Cucumis sativus
Cucsa.079660 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 2538836-2548835 Cucumis sativus
Cucsa.079660 10.0kb downstream 10.0kb downstream 10545 true scaffold00793: 2528291-2538835 Cucumis sativus
Cucsa.079660 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 2528291-2538290 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602335 5273 Angiosperm Singleton cluster - no MSA
122232577 5265 Fabidae Singleton cluster - no MSA
123978810 5270 Rosid Singleton cluster - no MSA
123554487 5271 Pentapetalae Singleton cluster - no MSA
122589301 5272 Eudicot Singleton cluster - no MSA
120874626 5274 Embryophyte Singleton cluster - no MSA
122915517 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain