Gene : Cucsa.078200 C. sativus v1.0
Defline:  (1 of 409) PF13041 - PPR repeat family (PPR_2) Genomic Order:  33
Name:  ? Cucsa.078200 Secondary Identifier:  ? PAC:16956051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.078200 0.5kb upstream 0.5kb upstream 3682 true scaffold00793: 457082-460763 Cucumis sativus
Cucsa.078200 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 457082-457581 Cucumis sativus
Cucsa.078200 0.5kb downstream 0.5kb downstream 3682 true scaffold00793: 457582-461263 Cucumis sativus
Cucsa.078200 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 460764-461263 Cucumis sativus
Cucsa.078200 1.0kb upstream 1.0kb upstream 4182 true scaffold00793: 456582-460763 Cucumis sativus
Cucsa.078200 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 456582-457581 Cucumis sativus
Cucsa.078200 1.0kb downstream 1.0kb downstream 4182 true scaffold00793: 457582-461763 Cucumis sativus
Cucsa.078200 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 460764-461763 Cucumis sativus
Cucsa.078200 2.0kb upstream 2.0kb upstream 5182 true scaffold00793: 455582-460763 Cucumis sativus
Cucsa.078200 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 455582-457581 Cucumis sativus
Cucsa.078200 2.0kb downstream 2.0kb downstream 5182 true scaffold00793: 457582-462763 Cucumis sativus
Cucsa.078200 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 460764-462763 Cucumis sativus
Cucsa.078200 5.0kb upstream 5.0kb upstream 8182 true scaffold00793: 452582-460763 Cucumis sativus
Cucsa.078200 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 452582-457581 Cucumis sativus
Cucsa.078200 5.0kb downstream 5.0kb downstream 8182 true scaffold00793: 457582-465763 Cucumis sativus
Cucsa.078200 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 460764-465763 Cucumis sativus
Cucsa.078200 10.0kb upstream 10.0kb upstream 13182 true scaffold00793: 447582-460763 Cucumis sativus
Cucsa.078200 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 447582-457581 Cucumis sativus
Cucsa.078200 10.0kb downstream 10.0kb downstream 13182 true scaffold00793: 457582-470763 Cucumis sativus
Cucsa.078200 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 460764-470763 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302041 5265 Fabidae View MSA
124062827 5270 Rosid View MSA
123748813 5271 Pentapetalae View MSA
122787723 5272 Eudicot View MSA
122046252 5273 Angiosperm View MSA
121346998 5274 Embryophyte View MSA
123380477 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain