Gene : Cucsa.078260 C. sativus v1.0
Defline:  (1 of 1) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Genomic Order:  39
Name:  ? Cucsa.078260 Secondary Identifier:  ? PAC:16956059
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.078260 0.5kb upstream 0.5kb upstream 6880 true scaffold00793: 533257-540136 Cucumis sativus
Cucsa.078260 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 533257-533756 Cucumis sativus
Cucsa.078260 0.5kb downstream 0.5kb downstream 6880 true scaffold00793: 533757-540636 Cucumis sativus
Cucsa.078260 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 540137-540636 Cucumis sativus
Cucsa.078260 1.0kb upstream 1.0kb upstream 7380 true scaffold00793: 532757-540136 Cucumis sativus
Cucsa.078260 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 532757-533756 Cucumis sativus
Cucsa.078260 1.0kb downstream 1.0kb downstream 7380 true scaffold00793: 533757-541136 Cucumis sativus
Cucsa.078260 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 540137-541136 Cucumis sativus
Cucsa.078260 2.0kb upstream 2.0kb upstream 8380 true scaffold00793: 531757-540136 Cucumis sativus
Cucsa.078260 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 531757-533756 Cucumis sativus
Cucsa.078260 2.0kb downstream 2.0kb downstream 8380 true scaffold00793: 533757-542136 Cucumis sativus
Cucsa.078260 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 540137-542136 Cucumis sativus
Cucsa.078260 5.0kb upstream 5.0kb upstream 11380 true scaffold00793: 528757-540136 Cucumis sativus
Cucsa.078260 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 528757-533756 Cucumis sativus
Cucsa.078260 5.0kb downstream 5.0kb downstream 11380 true scaffold00793: 533757-545136 Cucumis sativus
Cucsa.078260 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 540137-545136 Cucumis sativus
Cucsa.078260 10.0kb upstream 10.0kb upstream 16380 true scaffold00793: 523757-540136 Cucumis sativus
Cucsa.078260 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 523757-533756 Cucumis sativus
Cucsa.078260 10.0kb downstream 10.0kb downstream 16380 true scaffold00793: 533757-550136 Cucumis sativus
Cucsa.078260 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 540137-550136 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302034 5265 Fabidae View MSA
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain