Gene : Cucsa.088390 C. sativus v1.0
Defline:  (1 of 39) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  92
Name:  ? Cucsa.088390 Secondary Identifier:  ? PAC:16957000
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088390 0.5kb upstream 0.5kb upstream 3089 true scaffold00888: 711287-714375 Cucumis sativus
Cucsa.088390 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 713876-714375 Cucumis sativus
Cucsa.088390 0.5kb downstream 0.5kb downstream 3089 true scaffold00888: 710787-713875 Cucumis sativus
Cucsa.088390 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 710787-711286 Cucumis sativus
Cucsa.088390 1.0kb upstream 1.0kb upstream 3589 true scaffold00888: 711287-714875 Cucumis sativus
Cucsa.088390 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 713876-714875 Cucumis sativus
Cucsa.088390 1.0kb downstream 1.0kb downstream 3589 true scaffold00888: 710287-713875 Cucumis sativus
Cucsa.088390 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 710287-711286 Cucumis sativus
Cucsa.088390 2.0kb upstream 2.0kb upstream 4589 true scaffold00888: 711287-715875 Cucumis sativus
Cucsa.088390 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 713876-715875 Cucumis sativus
Cucsa.088390 2.0kb downstream 2.0kb downstream 4589 true scaffold00888: 709287-713875 Cucumis sativus
Cucsa.088390 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 709287-711286 Cucumis sativus
Cucsa.088390 5.0kb upstream 5.0kb upstream 7589 true scaffold00888: 711287-718875 Cucumis sativus
Cucsa.088390 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 713876-718875 Cucumis sativus
Cucsa.088390 5.0kb downstream 5.0kb downstream 7589 true scaffold00888: 706287-713875 Cucumis sativus
Cucsa.088390 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 706287-711286 Cucumis sativus
Cucsa.088390 10.0kb upstream 10.0kb upstream 12589 true scaffold00888: 711287-723875 Cucumis sativus
Cucsa.088390 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 713876-723875 Cucumis sativus
Cucsa.088390 10.0kb downstream 10.0kb downstream 12589 true scaffold00888: 701287-713875 Cucumis sativus
Cucsa.088390 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 701287-711286 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306369 5265 Fabidae View MSA
124062465 5270 Rosid View MSA
123739222 5271 Pentapetalae View MSA
122787096 5272 Eudicot View MSA
122044895 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain