Gene : Cucsa.088420 C. sativus v1.0
Defline:  (1 of 1) PTHR14190 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Genomic Order:  95
Name:  ? Cucsa.088420 Secondary Identifier:  ? PAC:16957003
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088420 0.5kb upstream 0.5kb upstream 16498 true scaffold00888: 724068-740565 Cucumis sativus
Cucsa.088420 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 740066-740565 Cucumis sativus
Cucsa.088420 0.5kb downstream 0.5kb downstream 16498 true scaffold00888: 723568-740065 Cucumis sativus
Cucsa.088420 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 723568-724067 Cucumis sativus
Cucsa.088420 1.0kb upstream 1.0kb upstream 16998 true scaffold00888: 724068-741065 Cucumis sativus
Cucsa.088420 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 740066-741065 Cucumis sativus
Cucsa.088420 1.0kb downstream 1.0kb downstream 16998 true scaffold00888: 723068-740065 Cucumis sativus
Cucsa.088420 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 723068-724067 Cucumis sativus
Cucsa.088420 2.0kb upstream 2.0kb upstream 17998 true scaffold00888: 724068-742065 Cucumis sativus
Cucsa.088420 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 740066-742065 Cucumis sativus
Cucsa.088420 2.0kb downstream 2.0kb downstream 17998 true scaffold00888: 722068-740065 Cucumis sativus
Cucsa.088420 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 722068-724067 Cucumis sativus
Cucsa.088420 5.0kb upstream 5.0kb upstream 20998 true scaffold00888: 724068-745065 Cucumis sativus
Cucsa.088420 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 740066-745065 Cucumis sativus
Cucsa.088420 5.0kb downstream 5.0kb downstream 20998 true scaffold00888: 719068-740065 Cucumis sativus
Cucsa.088420 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 719068-724067 Cucumis sativus
Cucsa.088420 10.0kb upstream 10.0kb upstream 25998 true scaffold00888: 724068-750065 Cucumis sativus
Cucsa.088420 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 740066-750065 Cucumis sativus
Cucsa.088420 10.0kb downstream 10.0kb downstream 25998 true scaffold00888: 714068-740065 Cucumis sativus
Cucsa.088420 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 714068-724067 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305451 5265 Fabidae View MSA
124065275 5270 Rosid View MSA
123738224 5271 Pentapetalae View MSA
122792330 5272 Eudicot View MSA
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain