Gene : Cucsa.088590 C. sativus v1.0
Defline:  (1 of 1) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  112
Name:  ? Cucsa.088590 Secondary Identifier:  ? PAC:16957031
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6124 Cucumis sativus pathologic  
Csativus PWY-841 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088590 0.5kb upstream 0.5kb upstream 11231 true scaffold00888: 852756-863986 Cucumis sativus
Cucsa.088590 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 852756-853255 Cucumis sativus
Cucsa.088590 0.5kb downstream 0.5kb downstream 11231 true scaffold00888: 853256-864486 Cucumis sativus
Cucsa.088590 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 863987-864486 Cucumis sativus
Cucsa.088590 1.0kb upstream 1.0kb upstream 11731 true scaffold00888: 852256-863986 Cucumis sativus
Cucsa.088590 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 852256-853255 Cucumis sativus
Cucsa.088590 1.0kb downstream 1.0kb downstream 11731 true scaffold00888: 853256-864986 Cucumis sativus
Cucsa.088590 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 863987-864986 Cucumis sativus
Cucsa.088590 2.0kb upstream 2.0kb upstream 12731 true scaffold00888: 851256-863986 Cucumis sativus
Cucsa.088590 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 851256-853255 Cucumis sativus
Cucsa.088590 2.0kb downstream 2.0kb downstream 12731 true scaffold00888: 853256-865986 Cucumis sativus
Cucsa.088590 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 863987-865986 Cucumis sativus
Cucsa.088590 5.0kb upstream 5.0kb upstream 15731 true scaffold00888: 848256-863986 Cucumis sativus
Cucsa.088590 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 848256-853255 Cucumis sativus
Cucsa.088590 5.0kb downstream 5.0kb downstream 15731 true scaffold00888: 853256-868986 Cucumis sativus
Cucsa.088590 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 863987-868986 Cucumis sativus
Cucsa.088590 10.0kb upstream 10.0kb upstream 20731 true scaffold00888: 843256-863986 Cucumis sativus
Cucsa.088590 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 843256-853255 Cucumis sativus
Cucsa.088590 10.0kb downstream 10.0kb downstream 20731 true scaffold00888: 853256-873986 Cucumis sativus
Cucsa.088590 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 863987-873986 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308610 5265 Fabidae View MSA
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain