Gene : Cucsa.086850 C. sativus v1.0
Defline:  (1 of 2) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  24
Name:  ? Cucsa.086850 Secondary Identifier:  ? PAC:16956813
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus LEU-DEG2-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.086850 0.5kb upstream 0.5kb upstream 6561 true scaffold00873: 220329-226889 Cucumis sativus
Cucsa.086850 0.5kb upstream 0.5kb upstream 500 false scaffold00873: 226390-226889 Cucumis sativus
Cucsa.086850 0.5kb downstream 0.5kb downstream 6561 true scaffold00873: 219829-226389 Cucumis sativus
Cucsa.086850 0.5kb downstream 0.5kb downstream 500 false scaffold00873: 219829-220328 Cucumis sativus
Cucsa.086850 1.0kb upstream 1.0kb upstream 7061 true scaffold00873: 220329-227389 Cucumis sativus
Cucsa.086850 1.0kb upstream 1.0kb upstream 1000 false scaffold00873: 226390-227389 Cucumis sativus
Cucsa.086850 1.0kb downstream 1.0kb downstream 7061 true scaffold00873: 219329-226389 Cucumis sativus
Cucsa.086850 1.0kb downstream 1.0kb downstream 1000 false scaffold00873: 219329-220328 Cucumis sativus
Cucsa.086850 2.0kb upstream 2.0kb upstream 8061 true scaffold00873: 220329-228389 Cucumis sativus
Cucsa.086850 2.0kb upstream 2.0kb upstream 2000 false scaffold00873: 226390-228389 Cucumis sativus
Cucsa.086850 2.0kb downstream 2.0kb downstream 8061 true scaffold00873: 218329-226389 Cucumis sativus
Cucsa.086850 2.0kb downstream 2.0kb downstream 2000 false scaffold00873: 218329-220328 Cucumis sativus
Cucsa.086850 5.0kb upstream 5.0kb upstream 11061 true scaffold00873: 220329-231389 Cucumis sativus
Cucsa.086850 5.0kb upstream 5.0kb upstream 5000 false scaffold00873: 226390-231389 Cucumis sativus
Cucsa.086850 5.0kb downstream 5.0kb downstream 11061 true scaffold00873: 215329-226389 Cucumis sativus
Cucsa.086850 5.0kb downstream 5.0kb downstream 5000 false scaffold00873: 215329-220328 Cucumis sativus
Cucsa.086850 10.0kb upstream 10.0kb upstream 16061 true scaffold00873: 220329-236389 Cucumis sativus
Cucsa.086850 10.0kb upstream 10.0kb upstream 10000 false scaffold00873: 226390-236389 Cucumis sativus
Cucsa.086850 10.0kb downstream 10.0kb downstream 16061 true scaffold00873: 210329-226389 Cucumis sativus
Cucsa.086850 10.0kb downstream 10.0kb downstream 10000 false scaffold00873: 210329-220328 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314208 5265 Fabidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain