Gene : Cucsa.085770 C. sativus v1.0
Defline:  (1 of 3) PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Genomic Order:  28
Name:  ? Cucsa.085770 Secondary Identifier:  ? PAC:16956696
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.085770 0.5kb upstream 0.5kb upstream 2735 true scaffold00870: 168267-171001 Cucumis sativus
Cucsa.085770 0.5kb upstream 0.5kb upstream 500 false scaffold00870: 170502-171001 Cucumis sativus
Cucsa.085770 0.5kb downstream 0.5kb downstream 2735 true scaffold00870: 167767-170501 Cucumis sativus
Cucsa.085770 0.5kb downstream 0.5kb downstream 500 false scaffold00870: 167767-168266 Cucumis sativus
Cucsa.085770 1.0kb upstream 1.0kb upstream 3235 true scaffold00870: 168267-171501 Cucumis sativus
Cucsa.085770 1.0kb upstream 1.0kb upstream 1000 false scaffold00870: 170502-171501 Cucumis sativus
Cucsa.085770 1.0kb downstream 1.0kb downstream 3235 true scaffold00870: 167267-170501 Cucumis sativus
Cucsa.085770 1.0kb downstream 1.0kb downstream 1000 false scaffold00870: 167267-168266 Cucumis sativus
Cucsa.085770 2.0kb upstream 2.0kb upstream 4235 true scaffold00870: 168267-172501 Cucumis sativus
Cucsa.085770 2.0kb upstream 2.0kb upstream 2000 false scaffold00870: 170502-172501 Cucumis sativus
Cucsa.085770 2.0kb downstream 2.0kb downstream 4235 true scaffold00870: 166267-170501 Cucumis sativus
Cucsa.085770 2.0kb downstream 2.0kb downstream 2000 false scaffold00870: 166267-168266 Cucumis sativus
Cucsa.085770 5.0kb upstream 5.0kb upstream 7235 true scaffold00870: 168267-175501 Cucumis sativus
Cucsa.085770 5.0kb upstream 5.0kb upstream 5000 false scaffold00870: 170502-175501 Cucumis sativus
Cucsa.085770 5.0kb downstream 5.0kb downstream 7235 true scaffold00870: 163267-170501 Cucumis sativus
Cucsa.085770 5.0kb downstream 5.0kb downstream 5000 false scaffold00870: 163267-168266 Cucumis sativus
Cucsa.085770 10.0kb upstream 10.0kb upstream 12235 true scaffold00870: 168267-180501 Cucumis sativus
Cucsa.085770 10.0kb upstream 10.0kb upstream 10000 false scaffold00870: 170502-180501 Cucumis sativus
Cucsa.085770 10.0kb downstream 10.0kb downstream 12235 true scaffold00870: 158267-170501 Cucumis sativus
Cucsa.085770 10.0kb downstream 10.0kb downstream 10000 false scaffold00870: 158267-168266 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041244 5273 Angiosperm View MSA
122312153 5265 Fabidae View MSA
124069314 5270 Rosid View MSA
123741745 5271 Pentapetalae View MSA
122788161 5272 Eudicot View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain