Gene : Cucsa.085800 C. sativus v1.0
Defline:  (1 of 1) PTHR12526//PTHR12526:SF341 - GLYCOSYLTRANSFERASE Genomic Order:  31
Name:  ? Cucsa.085800 Secondary Identifier:  ? PAC:16956700
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLYCOGENSYNTH-PWY Cucumis sativus pathologic  
Csativus PWY-622 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.085800 0.5kb upstream 0.5kb upstream 11830 true scaffold00870: 184590-196419 Cucumis sativus
Cucsa.085800 0.5kb upstream 0.5kb upstream 500 false scaffold00870: 195920-196419 Cucumis sativus
Cucsa.085800 0.5kb downstream 0.5kb downstream 11830 true scaffold00870: 184090-195919 Cucumis sativus
Cucsa.085800 0.5kb downstream 0.5kb downstream 500 false scaffold00870: 184090-184589 Cucumis sativus
Cucsa.085800 1.0kb upstream 1.0kb upstream 12330 true scaffold00870: 184590-196919 Cucumis sativus
Cucsa.085800 1.0kb upstream 1.0kb upstream 1000 false scaffold00870: 195920-196919 Cucumis sativus
Cucsa.085800 1.0kb downstream 1.0kb downstream 12330 true scaffold00870: 183590-195919 Cucumis sativus
Cucsa.085800 1.0kb downstream 1.0kb downstream 1000 false scaffold00870: 183590-184589 Cucumis sativus
Cucsa.085800 2.0kb upstream 2.0kb upstream 13330 true scaffold00870: 184590-197919 Cucumis sativus
Cucsa.085800 2.0kb upstream 2.0kb upstream 2000 false scaffold00870: 195920-197919 Cucumis sativus
Cucsa.085800 2.0kb downstream 2.0kb downstream 13330 true scaffold00870: 182590-195919 Cucumis sativus
Cucsa.085800 2.0kb downstream 2.0kb downstream 2000 false scaffold00870: 182590-184589 Cucumis sativus
Cucsa.085800 5.0kb upstream 5.0kb upstream 16330 true scaffold00870: 184590-200919 Cucumis sativus
Cucsa.085800 5.0kb upstream 5.0kb upstream 5000 false scaffold00870: 195920-200919 Cucumis sativus
Cucsa.085800 5.0kb downstream 5.0kb downstream 16330 true scaffold00870: 179590-195919 Cucumis sativus
Cucsa.085800 5.0kb downstream 5.0kb downstream 5000 false scaffold00870: 179590-184589 Cucumis sativus
Cucsa.085800 10.0kb upstream 10.0kb upstream 21330 true scaffold00870: 184590-205919 Cucumis sativus
Cucsa.085800 10.0kb upstream 10.0kb upstream 10000 false scaffold00870: 195920-205919 Cucumis sativus
Cucsa.085800 10.0kb downstream 10.0kb downstream 21330 true scaffold00870: 174590-195919 Cucumis sativus
Cucsa.085800 10.0kb downstream 10.0kb downstream 10000 false scaffold00870: 174590-184589 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302907 5265 Fabidae View MSA
124067154 5270 Rosid View MSA
123741369 5271 Pentapetalae View MSA
122793613 5272 Eudicot View MSA
122044782 5273 Angiosperm View MSA
121310340 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain