Gene : Cucsa.085180 C. sativus v1.0
Defline:  (1 of 2) PTHR12510 - TROPONIN C-AKIN-1 PROTEIN Genomic Order:  1
Name:  ? Cucsa.085180 Secondary Identifier:  ? PAC:16956626
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.085180 0.5kb upstream 0.5kb upstream 1412 true scaffold00867: 2144-3555 Cucumis sativus
Cucsa.085180 0.5kb upstream 0.5kb upstream 500 false scaffold00867: 3056-3555 Cucumis sativus
Cucsa.085180 0.5kb downstream 0.5kb downstream 1412 true scaffold00867: 1644-3055 Cucumis sativus
Cucsa.085180 0.5kb downstream 0.5kb downstream 500 false scaffold00867: 1644-2143 Cucumis sativus
Cucsa.085180 1.0kb upstream 1.0kb upstream 1912 true scaffold00867: 2144-4055 Cucumis sativus
Cucsa.085180 1.0kb upstream 1.0kb upstream 1000 false scaffold00867: 3056-4055 Cucumis sativus
Cucsa.085180 1.0kb downstream 1.0kb downstream 1912 true scaffold00867: 1144-3055 Cucumis sativus
Cucsa.085180 1.0kb downstream 1.0kb downstream 1000 false scaffold00867: 1144-2143 Cucumis sativus
Cucsa.085180 2.0kb upstream 2.0kb upstream 2912 true scaffold00867: 2144-5055 Cucumis sativus
Cucsa.085180 2.0kb upstream 2.0kb upstream 2000 false scaffold00867: 3056-5055 Cucumis sativus
Cucsa.085180 2.0kb downstream 2.0kb downstream 2912 true scaffold00867: 144-3055 Cucumis sativus
Cucsa.085180 2.0kb downstream 2.0kb downstream 2000 false scaffold00867: 144-2143 Cucumis sativus
Cucsa.085180 5.0kb upstream 5.0kb upstream 5912 true scaffold00867: 2144-8055 Cucumis sativus
Cucsa.085180 5.0kb upstream 5.0kb upstream 5000 false scaffold00867: 3056-8055 Cucumis sativus
Cucsa.085180 5.0kb downstream 5.0kb downstream 3055 true scaffold00867: 1-3055 Cucumis sativus
Cucsa.085180 5.0kb downstream 5.0kb downstream 2143 false scaffold00867: 1-2143 Cucumis sativus
Cucsa.085180 10.0kb upstream 10.0kb upstream 10912 true scaffold00867: 2144-13055 Cucumis sativus
Cucsa.085180 10.0kb upstream 10.0kb upstream 10000 false scaffold00867: 3056-13055 Cucumis sativus
Cucsa.085180 10.0kb downstream 10.0kb downstream 3055 true scaffold00867: 1-3055 Cucumis sativus
Cucsa.085180 10.0kb downstream 10.0kb downstream 2143 false scaffold00867: 1-2143 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303100 5265 Fabidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain