Gene : Cucsa.084890 C. sativus v1.0
Defline:  (1 of 2) PTHR16019 - SYNAPSE-ASSOCIATED PROTEIN Genomic Order:  70
Name:  ? Cucsa.084890 Secondary Identifier:  ? PAC:16956608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.084890 0.5kb upstream 0.5kb upstream 1895 true scaffold00862: 547385-549279 Cucumis sativus
Cucsa.084890 0.5kb upstream 0.5kb upstream 500 false scaffold00862: 547385-547884 Cucumis sativus
Cucsa.084890 0.5kb downstream 0.5kb downstream 1895 true scaffold00862: 547885-549779 Cucumis sativus
Cucsa.084890 0.5kb downstream 0.5kb downstream 500 false scaffold00862: 549280-549779 Cucumis sativus
Cucsa.084890 1.0kb upstream 1.0kb upstream 2395 true scaffold00862: 546885-549279 Cucumis sativus
Cucsa.084890 1.0kb upstream 1.0kb upstream 1000 false scaffold00862: 546885-547884 Cucumis sativus
Cucsa.084890 1.0kb downstream 1.0kb downstream 2395 true scaffold00862: 547885-550279 Cucumis sativus
Cucsa.084890 1.0kb downstream 1.0kb downstream 1000 false scaffold00862: 549280-550279 Cucumis sativus
Cucsa.084890 2.0kb upstream 2.0kb upstream 3395 true scaffold00862: 545885-549279 Cucumis sativus
Cucsa.084890 2.0kb upstream 2.0kb upstream 2000 false scaffold00862: 545885-547884 Cucumis sativus
Cucsa.084890 2.0kb downstream 2.0kb downstream 3395 true scaffold00862: 547885-551279 Cucumis sativus
Cucsa.084890 2.0kb downstream 2.0kb downstream 2000 false scaffold00862: 549280-551279 Cucumis sativus
Cucsa.084890 5.0kb upstream 5.0kb upstream 6395 true scaffold00862: 542885-549279 Cucumis sativus
Cucsa.084890 5.0kb upstream 5.0kb upstream 5000 false scaffold00862: 542885-547884 Cucumis sativus
Cucsa.084890 5.0kb downstream 5.0kb downstream 6395 true scaffold00862: 547885-554279 Cucumis sativus
Cucsa.084890 5.0kb downstream 5.0kb downstream 5000 false scaffold00862: 549280-554279 Cucumis sativus
Cucsa.084890 10.0kb upstream 10.0kb upstream 11395 true scaffold00862: 537885-549279 Cucumis sativus
Cucsa.084890 10.0kb upstream 10.0kb upstream 10000 false scaffold00862: 537885-547884 Cucumis sativus
Cucsa.084890 10.0kb downstream 10.0kb downstream 11395 true scaffold00862: 547885-559279 Cucumis sativus
Cucsa.084890 10.0kb downstream 10.0kb downstream 10000 false scaffold00862: 549280-559279 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301905 5265 Fabidae View MSA
124071131 5270 Rosid View MSA
123740161 5271 Pentapetalae View MSA
122791095 5272 Eudicot View MSA
122047719 5273 Angiosperm View MSA
121347355 5274 Embryophyte View MSA
123428249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain