Gene : Cucsa.084290 C. sativus v1.0
Defline:  (1 of 409) PF13041 - PPR repeat family (PPR_2) Genomic Order:  10
Name:  ? Cucsa.084290 Secondary Identifier:  ? PAC:16956514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.084290 0.5kb upstream 0.5kb upstream 1632 true scaffold00862: 63782-65413 Cucumis sativus
Cucsa.084290 0.5kb upstream 0.5kb upstream 500 false scaffold00862: 64914-65413 Cucumis sativus
Cucsa.084290 0.5kb downstream 0.5kb downstream 1632 true scaffold00862: 63282-64913 Cucumis sativus
Cucsa.084290 0.5kb downstream 0.5kb downstream 500 false scaffold00862: 63282-63781 Cucumis sativus
Cucsa.084290 1.0kb upstream 1.0kb upstream 2132 true scaffold00862: 63782-65913 Cucumis sativus
Cucsa.084290 1.0kb upstream 1.0kb upstream 1000 false scaffold00862: 64914-65913 Cucumis sativus
Cucsa.084290 1.0kb downstream 1.0kb downstream 2132 true scaffold00862: 62782-64913 Cucumis sativus
Cucsa.084290 1.0kb downstream 1.0kb downstream 1000 false scaffold00862: 62782-63781 Cucumis sativus
Cucsa.084290 2.0kb upstream 2.0kb upstream 3132 true scaffold00862: 63782-66913 Cucumis sativus
Cucsa.084290 2.0kb upstream 2.0kb upstream 2000 false scaffold00862: 64914-66913 Cucumis sativus
Cucsa.084290 2.0kb downstream 2.0kb downstream 3132 true scaffold00862: 61782-64913 Cucumis sativus
Cucsa.084290 2.0kb downstream 2.0kb downstream 2000 false scaffold00862: 61782-63781 Cucumis sativus
Cucsa.084290 5.0kb upstream 5.0kb upstream 6132 true scaffold00862: 63782-69913 Cucumis sativus
Cucsa.084290 5.0kb upstream 5.0kb upstream 5000 false scaffold00862: 64914-69913 Cucumis sativus
Cucsa.084290 5.0kb downstream 5.0kb downstream 6132 true scaffold00862: 58782-64913 Cucumis sativus
Cucsa.084290 5.0kb downstream 5.0kb downstream 5000 false scaffold00862: 58782-63781 Cucumis sativus
Cucsa.084290 10.0kb upstream 10.0kb upstream 11132 true scaffold00862: 63782-74913 Cucumis sativus
Cucsa.084290 10.0kb upstream 10.0kb upstream 10000 false scaffold00862: 64914-74913 Cucumis sativus
Cucsa.084290 10.0kb downstream 10.0kb downstream 11132 true scaffold00862: 53782-64913 Cucumis sativus
Cucsa.084290 10.0kb downstream 10.0kb downstream 10000 false scaffold00862: 53782-63781 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314145 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain